Gene : Glyma.01G192900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21314:SF0 - UPF0553 PROTEIN C9ORF64 Genomic Order:  1929
Name:  ? Glyma.01G192900 Secondary Identifier:  ? PAC:30542483
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G192900 0.5kb upstream 0.5kb upstream 4885 true Chr01: 52720955-52725839 Glycine max
Glyma.01G192900 0.5kb upstream 0.5kb upstream 500 false Chr01: 52725340-52725839 Glycine max
Glyma.01G192900 0.5kb downstream 0.5kb downstream 4885 true Chr01: 52720455-52725339 Glycine max
Glyma.01G192900 0.5kb downstream 0.5kb downstream 500 false Chr01: 52720455-52720954 Glycine max
Glyma.01G192900 1.0kb upstream 1.0kb upstream 5385 true Chr01: 52720955-52726339 Glycine max
Glyma.01G192900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 52725340-52726339 Glycine max
Glyma.01G192900 1.0kb downstream 1.0kb downstream 5385 true Chr01: 52719955-52725339 Glycine max
Glyma.01G192900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 52719955-52720954 Glycine max
Glyma.01G192900 2.0kb upstream 2.0kb upstream 6385 true Chr01: 52720955-52727339 Glycine max
Glyma.01G192900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 52725340-52727339 Glycine max
Glyma.01G192900 2.0kb downstream 2.0kb downstream 6385 true Chr01: 52718955-52725339 Glycine max
Glyma.01G192900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 52718955-52720954 Glycine max
Glyma.01G192900 5.0kb upstream 5.0kb upstream 9385 true Chr01: 52720955-52730339 Glycine max
Glyma.01G192900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 52725340-52730339 Glycine max
Glyma.01G192900 5.0kb downstream 5.0kb downstream 9385 true Chr01: 52715955-52725339 Glycine max
Glyma.01G192900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 52715955-52720954 Glycine max
Glyma.01G192900 10.0kb upstream 10.0kb upstream 14385 true Chr01: 52720955-52735339 Glycine max
Glyma.01G192900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 52725340-52735339 Glycine max
Glyma.01G192900 10.0kb downstream 10.0kb downstream 14385 true Chr01: 52710955-52725339 Glycine max
Glyma.01G192900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 52710955-52720954 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312059 5265 Fabidae View MSA
124070821 5270 Rosid View MSA
123742373 5271 Pentapetalae View MSA
122795462 5272 Eudicot View MSA
122048860 5273 Angiosperm View MSA
121348381 5274 Embryophyte View MSA
123425708 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.77729 0.0 8.15789    
cufflinks 2.41782 0.0 9.99389   High
cufflinks 1.19662 0.0 6.1039    
cufflinks 1.58913 0.0 7.52454    
cufflinks 0.183496 0.0 0.924761 Low Low
cufflinks 0.163258 0.0 0.810132 Low Low
cufflinks 1.79527 0.0 8.21314    
cufflinks 0.285377 0.0 1.86012    
cufflinks 0.199537 0.0 0.989908 Low Low
cufflinks 0.358        
cufflinks 0.84        
cufflinks 0.495        
cufflinks 0.048     Low Low
cufflinks 0.067     Low Low
cufflinks 0.953        
cufflinks 1.749        
cufflinks 0.259        
cufflinks 0.503        
cufflinks 0.772        
cufflinks 2.563       High
cufflinks 0.576        
cufflinks 1.929       High
cufflinks 2.443       High
cufflinks 0.45        
cufflinks 2.069       High
cufflinks 0.302        

0 Strain