Gene : Glyma.01G192000 G. max Wm82.a2.v1
Defline:  (1 of 5) PF04419//PF12907 - 4F5 protein family (4F5) // Zinc-binding (zf-met2) Genomic Order:  1920
Name:  ? Glyma.01G192000 Secondary Identifier:  ? PAC:30541865
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G192000 0.5kb upstream 0.5kb upstream 2265 true Chr01: 52642250-52644514 Glycine max
Glyma.01G192000 0.5kb upstream 0.5kb upstream 500 false Chr01: 52642250-52642749 Glycine max
Glyma.01G192000 0.5kb downstream 0.5kb downstream 2265 true Chr01: 52642750-52645014 Glycine max
Glyma.01G192000 0.5kb downstream 0.5kb downstream 500 false Chr01: 52644515-52645014 Glycine max
Glyma.01G192000 1.0kb upstream 1.0kb upstream 2765 true Chr01: 52641750-52644514 Glycine max
Glyma.01G192000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 52641750-52642749 Glycine max
Glyma.01G192000 1.0kb downstream 1.0kb downstream 2765 true Chr01: 52642750-52645514 Glycine max
Glyma.01G192000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 52644515-52645514 Glycine max
Glyma.01G192000 2.0kb upstream 2.0kb upstream 3765 true Chr01: 52640750-52644514 Glycine max
Glyma.01G192000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 52640750-52642749 Glycine max
Glyma.01G192000 2.0kb downstream 2.0kb downstream 3765 true Chr01: 52642750-52646514 Glycine max
Glyma.01G192000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 52644515-52646514 Glycine max
Glyma.01G192000 5.0kb upstream 5.0kb upstream 6765 true Chr01: 52637750-52644514 Glycine max
Glyma.01G192000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 52637750-52642749 Glycine max
Glyma.01G192000 5.0kb downstream 5.0kb downstream 6765 true Chr01: 52642750-52649514 Glycine max
Glyma.01G192000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 52644515-52649514 Glycine max
Glyma.01G192000 10.0kb upstream 10.0kb upstream 11765 true Chr01: 52632750-52644514 Glycine max
Glyma.01G192000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 52632750-52642749 Glycine max
Glyma.01G192000 10.0kb downstream 10.0kb downstream 11765 true Chr01: 52642750-52654514 Glycine max
Glyma.01G192000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 52644515-52654514 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304406 5265 Fabidae View MSA
124066852 5270 Rosid View MSA
123751262 5271 Pentapetalae View MSA
122792362 5272 Eudicot View MSA
122042016 5273 Angiosperm View MSA
121349419 5274 Embryophyte View MSA
123425398 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 69.3491 0.0 187.572 High Low
cufflinks 71.6436 0.0 194.188 High  
cufflinks 84.2224 0.0 231.446 High  
cufflinks 89.2703 0.0 246.188 High  
cufflinks 75.6501 0.0 205.877 High  
cufflinks 160.764 0.0 474.303 High High
cufflinks 104.215 0.0 291.33 High  
cufflinks 87.4234 0.0 240.666 High  
cufflinks 110.342 0.0 310.343 High  
cufflinks 22.745     High High
cufflinks 20.831     High  
cufflinks 25.407     High High
cufflinks 21.742     High  
cufflinks 17.59     High  
cufflinks 15.371     High Low
cufflinks 15.549     High Low
cufflinks 23.689     High High
cufflinks 25.598     High High
cufflinks 18.214     High  
cufflinks 15.817     High  
cufflinks 18.341     High  
cufflinks 15.593     High Low
cufflinks 16.691     High  
cufflinks 20.86     High  
cufflinks 15.369     High Low
cufflinks 16.958     High  

0 Strain