Gene : Glyma.01G199900 G. max Wm82.a2.v1
Genomic Order:  1999 Name:  ? Glyma.01G199900
Secondary Identifier:  ? PAC:30545125
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G199900 0.5kb upstream 0.5kb upstream 3347 true Chr01: 53356404-53359750 Glycine max
Glyma.01G199900 0.5kb upstream 0.5kb upstream 500 false Chr01: 53359251-53359750 Glycine max
Glyma.01G199900 0.5kb downstream 0.5kb downstream 3347 true Chr01: 53355904-53359250 Glycine max
Glyma.01G199900 0.5kb downstream 0.5kb downstream 500 false Chr01: 53355904-53356403 Glycine max
Glyma.01G199900 1.0kb upstream 1.0kb upstream 3847 true Chr01: 53356404-53360250 Glycine max
Glyma.01G199900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 53359251-53360250 Glycine max
Glyma.01G199900 1.0kb downstream 1.0kb downstream 3847 true Chr01: 53355404-53359250 Glycine max
Glyma.01G199900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 53355404-53356403 Glycine max
Glyma.01G199900 2.0kb upstream 2.0kb upstream 4847 true Chr01: 53356404-53361250 Glycine max
Glyma.01G199900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 53359251-53361250 Glycine max
Glyma.01G199900 2.0kb downstream 2.0kb downstream 4847 true Chr01: 53354404-53359250 Glycine max
Glyma.01G199900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 53354404-53356403 Glycine max
Glyma.01G199900 5.0kb upstream 5.0kb upstream 7847 true Chr01: 53356404-53364250 Glycine max
Glyma.01G199900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 53359251-53364250 Glycine max
Glyma.01G199900 5.0kb downstream 5.0kb downstream 7847 true Chr01: 53351404-53359250 Glycine max
Glyma.01G199900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 53351404-53356403 Glycine max
Glyma.01G199900 10.0kb upstream 10.0kb upstream 12847 true Chr01: 53356404-53369250 Glycine max
Glyma.01G199900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 53359251-53369250 Glycine max
Glyma.01G199900 10.0kb downstream 10.0kb downstream 12847 true Chr01: 53346404-53359250 Glycine max
Glyma.01G199900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 53346404-53356403 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028162 5273 Angiosperm View MSA
122312154 5265 Fabidae View MSA
124070832 5270 Rosid View MSA
123743000 5271 Pentapetalae View MSA
122797525 5272 Eudicot View MSA
121297693 5274 Embryophyte View MSA
123335723 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.9601 0.0 95.1566 High  
cufflinks 16.1817 0.0 47.5253    
cufflinks 30.3224 0.0 83.1346 High  
cufflinks 9.78638 0.0 30.8383   Low
cufflinks 25.7936 0.0 71.7925 High  
cufflinks 108.635 0.0 294.113 High High
cufflinks 17.1057 0.0 49.9954    
cufflinks 18.2868 0.0 52.9057    
cufflinks 23.5576 0.0 66.1426 High  
cufflinks 4.136        
cufflinks 14.18     High High
cufflinks 4.064        
cufflinks 6.115        
cufflinks 6.183        
cufflinks 4.309        
cufflinks 4.243        
cufflinks 12.252     High High
cufflinks 3.055        
cufflinks 2.848       Low
cufflinks 2.88       Low
cufflinks 9.381     High  
cufflinks 4.376        
cufflinks 2.499       Low
cufflinks 18.014     High High
cufflinks 3.399        
cufflinks 11.232     High High

0 Strain