Gene : Glyma.01G200700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR19282//PTHR19282:SF262 - TETRASPANIN Genomic Order:  2007
Name:  ? Glyma.01G200700 Secondary Identifier:  ? PAC:30543648
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G200700 0.5kb upstream 0.5kb upstream 5795 true Chr01: 53428442-53434236 Glycine max
Glyma.01G200700 0.5kb upstream 0.5kb upstream 500 false Chr01: 53433737-53434236 Glycine max
Glyma.01G200700 0.5kb downstream 0.5kb downstream 5795 true Chr01: 53427942-53433736 Glycine max
Glyma.01G200700 0.5kb downstream 0.5kb downstream 500 false Chr01: 53427942-53428441 Glycine max
Glyma.01G200700 1.0kb upstream 1.0kb upstream 6295 true Chr01: 53428442-53434736 Glycine max
Glyma.01G200700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 53433737-53434736 Glycine max
Glyma.01G200700 1.0kb downstream 1.0kb downstream 6295 true Chr01: 53427442-53433736 Glycine max
Glyma.01G200700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 53427442-53428441 Glycine max
Glyma.01G200700 2.0kb upstream 2.0kb upstream 7295 true Chr01: 53428442-53435736 Glycine max
Glyma.01G200700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 53433737-53435736 Glycine max
Glyma.01G200700 2.0kb downstream 2.0kb downstream 7295 true Chr01: 53426442-53433736 Glycine max
Glyma.01G200700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 53426442-53428441 Glycine max
Glyma.01G200700 5.0kb upstream 5.0kb upstream 10295 true Chr01: 53428442-53438736 Glycine max
Glyma.01G200700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 53433737-53438736 Glycine max
Glyma.01G200700 5.0kb downstream 5.0kb downstream 10295 true Chr01: 53423442-53433736 Glycine max
Glyma.01G200700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 53423442-53428441 Glycine max
Glyma.01G200700 10.0kb upstream 10.0kb upstream 15295 true Chr01: 53428442-53443736 Glycine max
Glyma.01G200700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 53433737-53443736 Glycine max
Glyma.01G200700 10.0kb downstream 10.0kb downstream 15295 true Chr01: 53418442-53433736 Glycine max
Glyma.01G200700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 53418442-53428441 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314300 5265 Fabidae View MSA
124065519 5270 Rosid View MSA
123751107 5271 Pentapetalae View MSA
122796943 5272 Eudicot View MSA
122050104 5273 Angiosperm View MSA
121351335 5274 Embryophyte View MSA
123424447 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.3803 0.0 33.7423   Low
cufflinks 14.0713 0.0 38.0868    
cufflinks 13.264 0.0 35.9504   Low
cufflinks 15.9623 0.0 42.9204    
cufflinks 15.8527 0.0 42.6483    
cufflinks 20.9939 0.0 56.0447    
cufflinks 24.8754 0.0 66.3694 High High
cufflinks 19.9285 0.0 53.2525    
cufflinks 19.2203 0.0 51.3988    
cufflinks 5.582       High
cufflinks 2.337       Low
cufflinks 3.463        
cufflinks 5.192       High
cufflinks 5.357       High
cufflinks 2.083       Low
cufflinks 3.428        
cufflinks 3.11        
cufflinks 4.555       High
cufflinks 3.425        
cufflinks 3.321        
cufflinks 2.167       Low
cufflinks 3.298        
cufflinks 3.828        
cufflinks 2.723        
cufflinks 3.247        
cufflinks 2.9        

0 Strain