Gene : Glyma.01G212700 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR12290:SF18 - PROTEIN CORNICHON HOMOLOG 3-RELATED Genomic Order:  2127
Name:  ? Glyma.01G212700 Secondary Identifier:  ? PAC:30544479
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G212700 0.5kb upstream 0.5kb upstream 3069 true Chr01: 54400551-54403619 Glycine max
Glyma.01G212700 0.5kb upstream 0.5kb upstream 500 false Chr01: 54400551-54401050 Glycine max
Glyma.01G212700 0.5kb downstream 0.5kb downstream 3069 true Chr01: 54401051-54404119 Glycine max
Glyma.01G212700 0.5kb downstream 0.5kb downstream 500 false Chr01: 54403620-54404119 Glycine max
Glyma.01G212700 1.0kb upstream 1.0kb upstream 3569 true Chr01: 54400051-54403619 Glycine max
Glyma.01G212700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 54400051-54401050 Glycine max
Glyma.01G212700 1.0kb downstream 1.0kb downstream 3569 true Chr01: 54401051-54404619 Glycine max
Glyma.01G212700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 54403620-54404619 Glycine max
Glyma.01G212700 2.0kb upstream 2.0kb upstream 4569 true Chr01: 54399051-54403619 Glycine max
Glyma.01G212700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 54399051-54401050 Glycine max
Glyma.01G212700 2.0kb downstream 2.0kb downstream 4569 true Chr01: 54401051-54405619 Glycine max
Glyma.01G212700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 54403620-54405619 Glycine max
Glyma.01G212700 5.0kb upstream 5.0kb upstream 7569 true Chr01: 54396051-54403619 Glycine max
Glyma.01G212700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 54396051-54401050 Glycine max
Glyma.01G212700 5.0kb downstream 5.0kb downstream 7569 true Chr01: 54401051-54408619 Glycine max
Glyma.01G212700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 54403620-54408619 Glycine max
Glyma.01G212700 10.0kb upstream 10.0kb upstream 12569 true Chr01: 54391051-54403619 Glycine max
Glyma.01G212700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 54391051-54401050 Glycine max
Glyma.01G212700 10.0kb downstream 10.0kb downstream 12569 true Chr01: 54401051-54413619 Glycine max
Glyma.01G212700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 54403620-54413619 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297939 5265 Fabidae View MSA
124061423 5270 Rosid View MSA
123752732 5271 Pentapetalae View MSA
122796851 5272 Eudicot View MSA
122045878 5273 Angiosperm View MSA
121348735 5274 Embryophyte View MSA
123427918 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.10839 0.0 11.6237    
cufflinks 2.94619 0.0 15.0581    
cufflinks 14.7345 0.0 46.3525   High
cufflinks 1.88965 0.0 10.5054    
cufflinks 0.715676 0.0 4.59559    
cufflinks 1.95411 0.0 10.8726    
cufflinks 5.59031 0.0 23.3141    
cufflinks 0.744387 0.0 4.89655    
cufflinks 0.190204 0.0 0.754922 Low Low
cufflinks 0.808        
cufflinks 0.042     Low Low
cufflinks 1.335        
cufflinks 0.108        
cufflinks 0.19        
cufflinks 0.062        
cufflinks 1.461        
cufflinks 0.023     Low Low
cufflinks 2.696       High
cufflinks 1.056        
cufflinks 1.472        
cufflinks 0.068        
cufflinks 1.313        
cufflinks 1.446        
cufflinks 0.033     Low Low
cufflinks 1.787       High
cufflinks 0.054     Low Low

0 Strain