Gene : Glyma.01G210600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10972:SF88 - OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 2A-RELATED Genomic Order:  2106
Name:  ? Glyma.01G210600 Secondary Identifier:  ? PAC:30543238
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G210600 0.5kb upstream 0.5kb upstream 10796 true Chr01: 54190043-54200838 Glycine max
Glyma.01G210600 0.5kb upstream 0.5kb upstream 500 false Chr01: 54200339-54200838 Glycine max
Glyma.01G210600 0.5kb downstream 0.5kb downstream 10796 true Chr01: 54189543-54200338 Glycine max
Glyma.01G210600 0.5kb downstream 0.5kb downstream 500 false Chr01: 54189543-54190042 Glycine max
Glyma.01G210600 1.0kb upstream 1.0kb upstream 11296 true Chr01: 54190043-54201338 Glycine max
Glyma.01G210600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 54200339-54201338 Glycine max
Glyma.01G210600 1.0kb downstream 1.0kb downstream 11296 true Chr01: 54189043-54200338 Glycine max
Glyma.01G210600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 54189043-54190042 Glycine max
Glyma.01G210600 2.0kb upstream 2.0kb upstream 12296 true Chr01: 54190043-54202338 Glycine max
Glyma.01G210600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 54200339-54202338 Glycine max
Glyma.01G210600 2.0kb downstream 2.0kb downstream 12296 true Chr01: 54188043-54200338 Glycine max
Glyma.01G210600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 54188043-54190042 Glycine max
Glyma.01G210600 5.0kb upstream 5.0kb upstream 15296 true Chr01: 54190043-54205338 Glycine max
Glyma.01G210600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 54200339-54205338 Glycine max
Glyma.01G210600 5.0kb downstream 5.0kb downstream 15296 true Chr01: 54185043-54200338 Glycine max
Glyma.01G210600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 54185043-54190042 Glycine max
Glyma.01G210600 10.0kb upstream 10.0kb upstream 20296 true Chr01: 54190043-54210338 Glycine max
Glyma.01G210600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 54200339-54210338 Glycine max
Glyma.01G210600 10.0kb downstream 10.0kb downstream 20296 true Chr01: 54180043-54200338 Glycine max
Glyma.01G210600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 54180043-54190042 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310093 5265 Fabidae View MSA
124074829 5270 Rosid View MSA
123752299 5271 Pentapetalae View MSA
122791261 5272 Eudicot View MSA
122049875 5273 Angiosperm View MSA
121348074 5274 Embryophyte View MSA
123428535 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.749764 0.0 5.2181   Low
cufflinks 17.0196 0.0 102.397   High
cufflinks 7.49488 0.0 42.464    
cufflinks 7.18964 0.0 42.4219    
cufflinks 8.22905 0.0 48.9977    
cufflinks 4.5828 0.0 23.383    
cufflinks 6.61756 0.0 44.2609    
cufflinks 7.33652 0.0 38.3268    
cufflinks 5.98099 0.0 32.5779    
cufflinks 0.328        
cufflinks 0.13        
cufflinks 0.403        
cufflinks 0.224        
cufflinks 0.245        
cufflinks 0.037     Low Low
cufflinks 0.318        
cufflinks 0.125        
cufflinks 0.831       High
cufflinks 0.515       High
cufflinks 0.356        
cufflinks 0.135        
cufflinks 0.299        
cufflinks 0.237        
cufflinks 0.092       Low
cufflinks 0.331        
cufflinks 0.112        

0 Strain