Gene : Glyma.01G084500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12385:SF36 - PLASMA-MEMBRANE CHOLINE TRANSPORTER-LIKE PROTEIN Genomic Order:  845
Name:  ? Glyma.01G084500 Secondary Identifier:  ? PAC:30542542
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G084500 0.5kb upstream 0.5kb upstream 12076 true Chr01: 24832712-24844787 Glycine max
Glyma.01G084500 0.5kb upstream 0.5kb upstream 500 false Chr01: 24844288-24844787 Glycine max
Glyma.01G084500 0.5kb downstream 0.5kb downstream 12076 true Chr01: 24832212-24844287 Glycine max
Glyma.01G084500 0.5kb downstream 0.5kb downstream 500 false Chr01: 24832212-24832711 Glycine max
Glyma.01G084500 1.0kb upstream 1.0kb upstream 12576 true Chr01: 24832712-24845287 Glycine max
Glyma.01G084500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 24844288-24845287 Glycine max
Glyma.01G084500 1.0kb downstream 1.0kb downstream 12576 true Chr01: 24831712-24844287 Glycine max
Glyma.01G084500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 24831712-24832711 Glycine max
Glyma.01G084500 2.0kb upstream 2.0kb upstream 13576 true Chr01: 24832712-24846287 Glycine max
Glyma.01G084500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 24844288-24846287 Glycine max
Glyma.01G084500 2.0kb downstream 2.0kb downstream 13576 true Chr01: 24830712-24844287 Glycine max
Glyma.01G084500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 24830712-24832711 Glycine max
Glyma.01G084500 5.0kb upstream 5.0kb upstream 16576 true Chr01: 24832712-24849287 Glycine max
Glyma.01G084500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 24844288-24849287 Glycine max
Glyma.01G084500 5.0kb downstream 5.0kb downstream 16576 true Chr01: 24827712-24844287 Glycine max
Glyma.01G084500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 24827712-24832711 Glycine max
Glyma.01G084500 10.0kb upstream 10.0kb upstream 21576 true Chr01: 24832712-24854287 Glycine max
Glyma.01G084500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 24844288-24854287 Glycine max
Glyma.01G084500 10.0kb downstream 10.0kb downstream 21576 true Chr01: 24822712-24844287 Glycine max
Glyma.01G084500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 24822712-24832711 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296575 5265 Fabidae View MSA
124063041 5270 Rosid View MSA
123736673 5271 Pentapetalae View MSA
122792379 5272 Eudicot View MSA
122042832 5273 Angiosperm View MSA
121344178 5274 Embryophyte View MSA
123428325 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.32326 0.0 19.241    
cufflinks 7.584 0.0 43.9445    
cufflinks 2.35346 0.0 12.0753   Low
cufflinks 10.9949 0.0 51.853    
cufflinks 9.05229 0.0 48.5707    
cufflinks 2.14285 0.0 12.0938   Low
cufflinks 6.18353 0.0 32.0352    
cufflinks 16.9339 0.0 96.5295   High
cufflinks 6.2668 0.0 34.7242    
cufflinks 0.191       High
cufflinks 0.03     Low Low
cufflinks 0.064     Low  
cufflinks 0.086     Low  
cufflinks 0.091        
cufflinks 0.086        
cufflinks 0.091     Low  
cufflinks 0.065     Low  
cufflinks 0.082     Low  
cufflinks 0.163       High
cufflinks 0.089     Low  
cufflinks 0.025     Low Low
cufflinks 0.104        
cufflinks 0.107        
cufflinks 0.017     Low Low
cufflinks 0.096     Low  
cufflinks 0.021     Low Low

0 Strain