Gene : Glyma.01G083500 G. max Wm82.a2.v1
Defline:  (1 of 3) PF13650 - Aspartyl protease (Asp_protease_2) Genomic Order:  835
Name:  ? Glyma.01G083500 Secondary Identifier:  ? PAC:30543692
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G083500 0.5kb upstream 0.5kb upstream 995 true Chr01: 24329592-24330586 Glycine max
Glyma.01G083500 0.5kb upstream 0.5kb upstream 500 false Chr01: 24329592-24330091 Glycine max
Glyma.01G083500 0.5kb downstream 0.5kb downstream 995 true Chr01: 24330092-24331086 Glycine max
Glyma.01G083500 0.5kb downstream 0.5kb downstream 500 false Chr01: 24330587-24331086 Glycine max
Glyma.01G083500 1.0kb upstream 1.0kb upstream 1495 true Chr01: 24329092-24330586 Glycine max
Glyma.01G083500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 24329092-24330091 Glycine max
Glyma.01G083500 1.0kb downstream 1.0kb downstream 1495 true Chr01: 24330092-24331586 Glycine max
Glyma.01G083500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 24330587-24331586 Glycine max
Glyma.01G083500 2.0kb upstream 2.0kb upstream 2495 true Chr01: 24328092-24330586 Glycine max
Glyma.01G083500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 24328092-24330091 Glycine max
Glyma.01G083500 2.0kb downstream 2.0kb downstream 2495 true Chr01: 24330092-24332586 Glycine max
Glyma.01G083500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 24330587-24332586 Glycine max
Glyma.01G083500 5.0kb upstream 5.0kb upstream 5495 true Chr01: 24325092-24330586 Glycine max
Glyma.01G083500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 24325092-24330091 Glycine max
Glyma.01G083500 5.0kb downstream 5.0kb downstream 5495 true Chr01: 24330092-24335586 Glycine max
Glyma.01G083500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 24330587-24335586 Glycine max
Glyma.01G083500 10.0kb upstream 10.0kb upstream 10495 true Chr01: 24320092-24330586 Glycine max
Glyma.01G083500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 24320092-24330091 Glycine max
Glyma.01G083500 10.0kb downstream 10.0kb downstream 10495 true Chr01: 24330092-24340586 Glycine max
Glyma.01G083500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 24330587-24340586 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028911 5273 Angiosperm View MSA
122250698 5265 Fabidae View MSA
124074879 5270 Rosid View MSA
123628692 5271 Pentapetalae View MSA
122662949 5272 Eudicot View MSA
121298339 5274 Embryophyte View MSA
123336316 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0652542 0.0 0.292811 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.113312 0.0 0.485602 Low  
cufflinks 0.163459 0.0 0.682537 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.032     Low  
cufflinks 0.19       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.031     Low  
cufflinks 0.024     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.062     Low  
cufflinks 0.074     Low  
cufflinks 0.035     Low  
cufflinks 0.034     Low  
cufflinks 0.095     Low High
cufflinks 0.041     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.029     Low  

0 Strain