Gene : Glyma.01G079300 G. max Wm82.a2.v1
Defline:  (1 of 1) KOG3102 - Uncharacterized conserved protein Genomic Order:  793
Name:  ? Glyma.01G079300 Secondary Identifier:  ? PAC:30545034
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Ontology Annotation Displayer

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Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G079300 0.5kb upstream 0.5kb upstream 8320 true Chr01: 20705939-20714258 Glycine max
Glyma.01G079300 0.5kb upstream 0.5kb upstream 500 false Chr01: 20713759-20714258 Glycine max
Glyma.01G079300 0.5kb downstream 0.5kb downstream 8320 true Chr01: 20705439-20713758 Glycine max
Glyma.01G079300 0.5kb downstream 0.5kb downstream 500 false Chr01: 20705439-20705938 Glycine max
Glyma.01G079300 1.0kb upstream 1.0kb upstream 8820 true Chr01: 20705939-20714758 Glycine max
Glyma.01G079300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 20713759-20714758 Glycine max
Glyma.01G079300 1.0kb downstream 1.0kb downstream 8820 true Chr01: 20704939-20713758 Glycine max
Glyma.01G079300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 20704939-20705938 Glycine max
Glyma.01G079300 2.0kb upstream 2.0kb upstream 9820 true Chr01: 20705939-20715758 Glycine max
Glyma.01G079300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 20713759-20715758 Glycine max
Glyma.01G079300 2.0kb downstream 2.0kb downstream 9820 true Chr01: 20703939-20713758 Glycine max
Glyma.01G079300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 20703939-20705938 Glycine max
Glyma.01G079300 5.0kb upstream 5.0kb upstream 12820 true Chr01: 20705939-20718758 Glycine max
Glyma.01G079300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 20713759-20718758 Glycine max
Glyma.01G079300 5.0kb downstream 5.0kb downstream 12820 true Chr01: 20700939-20713758 Glycine max
Glyma.01G079300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 20700939-20705938 Glycine max
Glyma.01G079300 10.0kb upstream 10.0kb upstream 17820 true Chr01: 20705939-20723758 Glycine max
Glyma.01G079300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 20713759-20723758 Glycine max
Glyma.01G079300 10.0kb downstream 10.0kb downstream 17820 true Chr01: 20695939-20713758 Glycine max
Glyma.01G079300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 20695939-20705938 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300312 5265 Fabidae View MSA
124068859 5270 Rosid View MSA
123738361 5271 Pentapetalae View MSA
122785872 5272 Eudicot View MSA
122050047 5273 Angiosperm View MSA
123429042 5275 Viridiplantae View MSA
121344227 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.9302 0.0 80.1482    
cufflinks 10.8161 0.0 60.4804    
cufflinks 23.2401 0.0 110.668 High High
cufflinks 12.3483 0.0 55.5975    
cufflinks 14.0214 0.0 71.7035    
cufflinks 21.433 0.0 103.664   High
cufflinks 7.8867 0.0 41.5613   Low
cufflinks 18.6451 0.0 90.5993    
cufflinks 15.1997 0.0 79.5534    
cufflinks 0.384        
cufflinks 0.711       High
cufflinks 0.522        
cufflinks 0.444        
cufflinks 0.384        
cufflinks 0.866       High
cufflinks 0.47        
cufflinks 0.26       Low
cufflinks 0.472        
cufflinks 0.326       Low
cufflinks 0.362        
cufflinks 0.629        
cufflinks 0.388        
cufflinks 0.338        
cufflinks 0.719       High
cufflinks 0.378        
cufflinks 0.543        

0 Strain