Gene : Glyma.01G079500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31636:SF11 - SCARECROW-LIKE PROTEIN 22-RELATED Genomic Order:  795
Name:  ? Glyma.01G079500 Secondary Identifier:  ? PAC:30543400
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G079500 0.5kb upstream 0.5kb upstream 3896 true Chr01: 20974302-20978197 Glycine max
Glyma.01G079500 0.5kb upstream 0.5kb upstream 500 false Chr01: 20977698-20978197 Glycine max
Glyma.01G079500 0.5kb downstream 0.5kb downstream 3896 true Chr01: 20973802-20977697 Glycine max
Glyma.01G079500 0.5kb downstream 0.5kb downstream 500 false Chr01: 20973802-20974301 Glycine max
Glyma.01G079500 1.0kb upstream 1.0kb upstream 4396 true Chr01: 20974302-20978697 Glycine max
Glyma.01G079500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 20977698-20978697 Glycine max
Glyma.01G079500 1.0kb downstream 1.0kb downstream 4396 true Chr01: 20973302-20977697 Glycine max
Glyma.01G079500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 20973302-20974301 Glycine max
Glyma.01G079500 2.0kb upstream 2.0kb upstream 5396 true Chr01: 20974302-20979697 Glycine max
Glyma.01G079500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 20977698-20979697 Glycine max
Glyma.01G079500 2.0kb downstream 2.0kb downstream 5396 true Chr01: 20972302-20977697 Glycine max
Glyma.01G079500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 20972302-20974301 Glycine max
Glyma.01G079500 5.0kb upstream 5.0kb upstream 8396 true Chr01: 20974302-20982697 Glycine max
Glyma.01G079500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 20977698-20982697 Glycine max
Glyma.01G079500 5.0kb downstream 5.0kb downstream 8396 true Chr01: 20969302-20977697 Glycine max
Glyma.01G079500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 20969302-20974301 Glycine max
Glyma.01G079500 10.0kb upstream 10.0kb upstream 13396 true Chr01: 20974302-20987697 Glycine max
Glyma.01G079500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 20977698-20987697 Glycine max
Glyma.01G079500 10.0kb downstream 10.0kb downstream 13396 true Chr01: 20964302-20977697 Glycine max
Glyma.01G079500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 20964302-20974301 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311488 5265 Fabidae View MSA
124067297 5270 Rosid View MSA
123748991 5271 Pentapetalae View MSA
122793941 5272 Eudicot View MSA
122048418 5273 Angiosperm View MSA
121350524 5274 Embryophyte View MSA
123381771 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.89057 0.0 18.4469    
cufflinks 8.3298 0.0 22.2291    
cufflinks 3.19357 0.0 8.97455   Low
cufflinks 8.41089 0.0 22.4418    
cufflinks 9.83776 0.0 26.2606    
cufflinks 3.70989 0.0 10.2693   Low
cufflinks 13.1074 0.0 35.2546   High
cufflinks 4.90777 0.0 13.3176    
cufflinks 10.4505 0.0 27.9231    
cufflinks 5.334        
cufflinks 3.482        
cufflinks 4.801        
cufflinks 11.878     High High
cufflinks 12.616     High High
cufflinks 4.996        
cufflinks 6.746        
cufflinks 1.691       Low
cufflinks 6.21        
cufflinks 9.792     High High
cufflinks 8.077     High  
cufflinks 2.978       Low
cufflinks 7.682     High  
cufflinks 7.497     High  
cufflinks 4.042        
cufflinks 7.072     High  
cufflinks 3.036       Low

0 Strain