Gene : Glyma.01G078400 G. max Wm82.a2.v1
Defline:  (1 of 17) PF04859 - Plant protein of unknown function (DUF641) (DUF641) Genomic Order:  784
Name:  ? Glyma.01G078400 Secondary Identifier:  ? PAC:30543777
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G078400 0.5kb upstream 0.5kb upstream 2940 true Chr01: 20105116-20108055 Glycine max
Glyma.01G078400 0.5kb upstream 0.5kb upstream 500 false Chr01: 20107556-20108055 Glycine max
Glyma.01G078400 0.5kb downstream 0.5kb downstream 2940 true Chr01: 20104616-20107555 Glycine max
Glyma.01G078400 0.5kb downstream 0.5kb downstream 500 false Chr01: 20104616-20105115 Glycine max
Glyma.01G078400 1.0kb upstream 1.0kb upstream 3440 true Chr01: 20105116-20108555 Glycine max
Glyma.01G078400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 20107556-20108555 Glycine max
Glyma.01G078400 1.0kb downstream 1.0kb downstream 3440 true Chr01: 20104116-20107555 Glycine max
Glyma.01G078400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 20104116-20105115 Glycine max
Glyma.01G078400 2.0kb upstream 2.0kb upstream 4440 true Chr01: 20105116-20109555 Glycine max
Glyma.01G078400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 20107556-20109555 Glycine max
Glyma.01G078400 2.0kb downstream 2.0kb downstream 4440 true Chr01: 20103116-20107555 Glycine max
Glyma.01G078400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 20103116-20105115 Glycine max
Glyma.01G078400 5.0kb upstream 5.0kb upstream 7440 true Chr01: 20105116-20112555 Glycine max
Glyma.01G078400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 20107556-20112555 Glycine max
Glyma.01G078400 5.0kb downstream 5.0kb downstream 7440 true Chr01: 20100116-20107555 Glycine max
Glyma.01G078400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 20100116-20105115 Glycine max
Glyma.01G078400 10.0kb upstream 10.0kb upstream 12440 true Chr01: 20105116-20117555 Glycine max
Glyma.01G078400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 20107556-20117555 Glycine max
Glyma.01G078400 10.0kb downstream 10.0kb downstream 12440 true Chr01: 20095116-20107555 Glycine max
Glyma.01G078400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 20095116-20105115 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041512 5273 Angiosperm View MSA
122303357 5265 Fabidae View MSA
124060813 5270 Rosid View MSA
123741078 5271 Pentapetalae View MSA
122786569 5272 Eudicot View MSA
121351569 5274 Embryophyte View MSA
123382231 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.9978 0.0 11.4448   High
cufflinks 1.47242 0.0 4.85175   Low
cufflinks 2.56298 0.0 7.83761    
cufflinks 2.85693 0.0 8.572    
cufflinks 3.23232 0.0 9.47736    
cufflinks 2.29995 0.0 7.08457    
cufflinks 2.03157 0.0 6.36417    
cufflinks 3.16596 0.0 9.35723    
cufflinks 1.8337 0.0 5.84113    
cufflinks 4.369       High
cufflinks 0.752       Low
cufflinks 2.078        
cufflinks 1.994        
cufflinks 3.037        
cufflinks 0.704       Low
cufflinks 2.059        
cufflinks 2.316        
cufflinks 2.113        
cufflinks 2.565        
cufflinks 2.595        
cufflinks 0.665       Low
cufflinks 2.775        
cufflinks 2.813        
cufflinks 1.251        
cufflinks 2.35        
cufflinks 1.217        

0 Strain