Gene : Glyma.01G094800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR23084:SF156 - RADIAL SPOKE HEAD 10 HOMOLOG B2 Genomic Order:  948
Name:  ? Glyma.01G094800 Secondary Identifier:  ? PAC:30544837
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6351 Glycine max pathologic  
Gmax PWY-6352 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G094800 0.5kb upstream 0.5kb upstream 17510 true Chr01: 29243452-29260961 Glycine max
Glyma.01G094800 0.5kb upstream 0.5kb upstream 500 false Chr01: 29243452-29243951 Glycine max
Glyma.01G094800 0.5kb downstream 0.5kb downstream 17510 true Chr01: 29243952-29261461 Glycine max
Glyma.01G094800 0.5kb downstream 0.5kb downstream 500 false Chr01: 29260962-29261461 Glycine max
Glyma.01G094800 1.0kb upstream 1.0kb upstream 18010 true Chr01: 29242952-29260961 Glycine max
Glyma.01G094800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 29242952-29243951 Glycine max
Glyma.01G094800 1.0kb downstream 1.0kb downstream 18010 true Chr01: 29243952-29261961 Glycine max
Glyma.01G094800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 29260962-29261961 Glycine max
Glyma.01G094800 2.0kb upstream 2.0kb upstream 19010 true Chr01: 29241952-29260961 Glycine max
Glyma.01G094800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 29241952-29243951 Glycine max
Glyma.01G094800 2.0kb downstream 2.0kb downstream 19010 true Chr01: 29243952-29262961 Glycine max
Glyma.01G094800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 29260962-29262961 Glycine max
Glyma.01G094800 5.0kb upstream 5.0kb upstream 22010 true Chr01: 29238952-29260961 Glycine max
Glyma.01G094800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 29238952-29243951 Glycine max
Glyma.01G094800 5.0kb downstream 5.0kb downstream 22010 true Chr01: 29243952-29265961 Glycine max
Glyma.01G094800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 29260962-29265961 Glycine max
Glyma.01G094800 10.0kb upstream 10.0kb upstream 27010 true Chr01: 29233952-29260961 Glycine max
Glyma.01G094800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 29233952-29243951 Glycine max
Glyma.01G094800 10.0kb downstream 10.0kb downstream 27010 true Chr01: 29243952-29270961 Glycine max
Glyma.01G094800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 29260962-29270961 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314429 5265 Fabidae View MSA
124068935 5270 Rosid View MSA
123741886 5271 Pentapetalae View MSA
122788830 5272 Eudicot View MSA
122047970 5273 Angiosperm View MSA
121346800 5274 Embryophyte View MSA
123428791 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.3906 0.0 9.17905   Low
cufflinks 2.29729 0.0 8.9946   Low
cufflinks 3.43675 0.0 16.8383    
cufflinks 3.93271 0.0 20.0073   High
cufflinks 3.48145 0.0 15.4293    
cufflinks 2.89262 0.0 10.487    
cufflinks 2.57385 0.0 12.4968    
cufflinks 3.28231 0.0 20.3955    
cufflinks 3.47805 0.0 21.7899    
cufflinks 0.126        
cufflinks 0.168        
cufflinks 0.169        
cufflinks 0.128        
cufflinks 0.129        
cufflinks 0.14        
cufflinks 0.151        
cufflinks 0.111       Low
cufflinks 0.198       High
cufflinks 0.145        
cufflinks 0.145        
cufflinks 0.192       High
cufflinks 0.146        
cufflinks 0.094     Low Low
cufflinks 0.222       High
cufflinks 0.136        
cufflinks 0.151        

0 Strain