Gene : Glyma.01G087700 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR27003:SF5 - DI-GLUCOSE BINDING PROTEIN WITH LEUCINE-RICH REPEAT DOMAIN Genomic Order:  877
Name:  ? Glyma.01G087700 Secondary Identifier:  ? PAC:30543952
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G087700 0.5kb upstream 0.5kb upstream 13044 true Chr01: 26564974-26578017 Glycine max
Glyma.01G087700 0.5kb upstream 0.5kb upstream 500 false Chr01: 26577518-26578017 Glycine max
Glyma.01G087700 0.5kb downstream 0.5kb downstream 13044 true Chr01: 26564474-26577517 Glycine max
Glyma.01G087700 0.5kb downstream 0.5kb downstream 500 false Chr01: 26564474-26564973 Glycine max
Glyma.01G087700 1.0kb upstream 1.0kb upstream 13544 true Chr01: 26564974-26578517 Glycine max
Glyma.01G087700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 26577518-26578517 Glycine max
Glyma.01G087700 1.0kb downstream 1.0kb downstream 13544 true Chr01: 26563974-26577517 Glycine max
Glyma.01G087700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 26563974-26564973 Glycine max
Glyma.01G087700 2.0kb upstream 2.0kb upstream 14544 true Chr01: 26564974-26579517 Glycine max
Glyma.01G087700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 26577518-26579517 Glycine max
Glyma.01G087700 2.0kb downstream 2.0kb downstream 14544 true Chr01: 26562974-26577517 Glycine max
Glyma.01G087700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 26562974-26564973 Glycine max
Glyma.01G087700 5.0kb upstream 5.0kb upstream 17544 true Chr01: 26564974-26582517 Glycine max
Glyma.01G087700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 26577518-26582517 Glycine max
Glyma.01G087700 5.0kb downstream 5.0kb downstream 17544 true Chr01: 26559974-26577517 Glycine max
Glyma.01G087700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 26559974-26564973 Glycine max
Glyma.01G087700 10.0kb upstream 10.0kb upstream 22544 true Chr01: 26564974-26587517 Glycine max
Glyma.01G087700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 26577518-26587517 Glycine max
Glyma.01G087700 10.0kb downstream 10.0kb downstream 22544 true Chr01: 26554974-26577517 Glycine max
Glyma.01G087700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 26554974-26564973 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305609 5265 Fabidae View MSA
124063346 5270 Rosid View MSA
123750625 5271 Pentapetalae View MSA
122787899 5272 Eudicot View MSA
122042080 5273 Angiosperm View MSA
121348136 5274 Embryophyte View MSA
123380739 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.91878 0.0 13.6537    
cufflinks 7.23125 0.0 19.5658   High
cufflinks 2.9405 0.0 8.69641   Low
cufflinks 5.86023 0.0 16.0622    
cufflinks 5.34714 0.0 14.7093    
cufflinks 2.66419 0.0 7.93269   Low
cufflinks 3.80862 0.0 10.8545    
cufflinks 6.41146 0.0 17.4687    
cufflinks 5.74874 0.0 15.7588    
cufflinks 1.173        
cufflinks 0.3       Low
cufflinks 0.865        
cufflinks 1.103        
cufflinks 1.131        
cufflinks 0.704        
cufflinks 1.231        
cufflinks 0.448       Low
cufflinks 1.175        
cufflinks 2.267       High
cufflinks 1.51        
cufflinks 0.464       Low
cufflinks 1.497        
cufflinks 1.187        
cufflinks 0.377       Low
cufflinks 1.424        
cufflinks 0.51        

0 Strain