Gene : Glyma.01G089900 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR13586 - SCD6 PROTEIN-RELATED Genomic Order:  899
Name:  ? Glyma.01G089900 Secondary Identifier:  ? PAC:30543795
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G089900 0.5kb upstream 0.5kb upstream 6877 true Chr01: 27179319-27186195 Glycine max
Glyma.01G089900 0.5kb upstream 0.5kb upstream 500 false Chr01: 27185696-27186195 Glycine max
Glyma.01G089900 0.5kb downstream 0.5kb downstream 6877 true Chr01: 27178819-27185695 Glycine max
Glyma.01G089900 0.5kb downstream 0.5kb downstream 500 false Chr01: 27178819-27179318 Glycine max
Glyma.01G089900 1.0kb upstream 1.0kb upstream 7377 true Chr01: 27179319-27186695 Glycine max
Glyma.01G089900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 27185696-27186695 Glycine max
Glyma.01G089900 1.0kb downstream 1.0kb downstream 7377 true Chr01: 27178319-27185695 Glycine max
Glyma.01G089900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 27178319-27179318 Glycine max
Glyma.01G089900 2.0kb upstream 2.0kb upstream 8377 true Chr01: 27179319-27187695 Glycine max
Glyma.01G089900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 27185696-27187695 Glycine max
Glyma.01G089900 2.0kb downstream 2.0kb downstream 8377 true Chr01: 27177319-27185695 Glycine max
Glyma.01G089900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 27177319-27179318 Glycine max
Glyma.01G089900 5.0kb upstream 5.0kb upstream 11377 true Chr01: 27179319-27190695 Glycine max
Glyma.01G089900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 27185696-27190695 Glycine max
Glyma.01G089900 5.0kb downstream 5.0kb downstream 11377 true Chr01: 27174319-27185695 Glycine max
Glyma.01G089900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 27174319-27179318 Glycine max
Glyma.01G089900 10.0kb upstream 10.0kb upstream 16377 true Chr01: 27179319-27195695 Glycine max
Glyma.01G089900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 27185696-27195695 Glycine max
Glyma.01G089900 10.0kb downstream 10.0kb downstream 16377 true Chr01: 27169319-27185695 Glycine max
Glyma.01G089900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 27169319-27179318 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309189 5265 Fabidae View MSA
124065537 5270 Rosid View MSA
123751625 5271 Pentapetalae View MSA
122797908 5272 Eudicot View MSA
122051702 5273 Angiosperm View MSA
121348013 5274 Embryophyte View MSA
123428687 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.8982 0.0 90.9725 High  
cufflinks 24.0189 0.0 95.3061 High  
cufflinks 22.1369 0.0 87.1479 High  
cufflinks 27.6233 0.0 111.922 High  
cufflinks 25.5825 0.0 102.479 High  
cufflinks 14.7403 0.0 59.3104   Low
cufflinks 33.8025 0.0 142.826 High High
cufflinks 24.646 0.0 98.0863 High  
cufflinks 19.9274 0.0 77.1892 High  
cufflinks 2.454        
cufflinks 1.509       Low
cufflinks 2.523        
cufflinks 2.948        
cufflinks 3.641       High
cufflinks 1.72        
cufflinks 2.287        
cufflinks 1.245       Low
cufflinks 2.807        
cufflinks 3.576       High
cufflinks 2.151        
cufflinks 2.025        
cufflinks 2.368        
cufflinks 2.369        
cufflinks 1.656       Low
cufflinks 2.088        
cufflinks 1.947        

0 Strain