Gene : Glyma.01G101600 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR22773:SF86 - NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT 2 A, CHLOROPLASTIC-RELATED Genomic Order:  1016
Name:  ? Glyma.01G101600 Secondary Identifier:  ? PAC:30542358
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G101600 0.5kb upstream 0.5kb upstream 934 true Chr01: 33858350-33859283 Glycine max
Glyma.01G101600 0.5kb upstream 0.5kb upstream 500 false Chr01: 33858784-33859283 Glycine max
Glyma.01G101600 0.5kb downstream 0.5kb downstream 934 true Chr01: 33857850-33858783 Glycine max
Glyma.01G101600 0.5kb downstream 0.5kb downstream 500 false Chr01: 33857850-33858349 Glycine max
Glyma.01G101600 1.0kb upstream 1.0kb upstream 1434 true Chr01: 33858350-33859783 Glycine max
Glyma.01G101600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 33858784-33859783 Glycine max
Glyma.01G101600 1.0kb downstream 1.0kb downstream 1434 true Chr01: 33857350-33858783 Glycine max
Glyma.01G101600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 33857350-33858349 Glycine max
Glyma.01G101600 2.0kb upstream 2.0kb upstream 2434 true Chr01: 33858350-33860783 Glycine max
Glyma.01G101600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 33858784-33860783 Glycine max
Glyma.01G101600 2.0kb downstream 2.0kb downstream 2434 true Chr01: 33856350-33858783 Glycine max
Glyma.01G101600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 33856350-33858349 Glycine max
Glyma.01G101600 5.0kb upstream 5.0kb upstream 5434 true Chr01: 33858350-33863783 Glycine max
Glyma.01G101600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 33858784-33863783 Glycine max
Glyma.01G101600 5.0kb downstream 5.0kb downstream 5434 true Chr01: 33853350-33858783 Glycine max
Glyma.01G101600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 33853350-33858349 Glycine max
Glyma.01G101600 10.0kb upstream 10.0kb upstream 10434 true Chr01: 33858350-33868783 Glycine max
Glyma.01G101600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 33858784-33868783 Glycine max
Glyma.01G101600 10.0kb downstream 10.0kb downstream 10434 true Chr01: 33848350-33858783 Glycine max
Glyma.01G101600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 33848350-33858349 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122248279 5265 Fabidae Singleton cluster - no MSA
124071517 5270 Rosid View MSA
123751395 5271 Pentapetalae View MSA
122774002 5272 Eudicot View MSA
122049707 5273 Angiosperm View MSA
121351606 5274 Embryophyte View MSA
123428700 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.667369 0.0 2.69129    
cufflinks 0.254267 0.0 1.08606    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 4.48427 0.0 16.6769   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.53111 0.0 13.3054    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.126311 0.0 0.571304 Low Low
cufflinks 0.069     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.037     Low Low
cufflinks 0.036     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.119        
cufflinks 0.068     Low  
cufflinks 0.068     Low  
cufflinks 0.063     Low  
cufflinks 0.322       High
cufflinks 0.04     Low Low
cufflinks 0.303       High
cufflinks 0.508       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.24        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain