Gene : Glyma.01G105500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11599:SF16 - PROTEASOME SUBUNIT ALPHA TYPE-2 Genomic Order:  1055
Name:  ? Glyma.01G105500 Secondary Identifier:  ? PAC:30542419
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G105500 0.5kb upstream 0.5kb upstream 8737 true Chr01: 35644567-35653303 Glycine max
Glyma.01G105500 0.5kb upstream 0.5kb upstream 500 false Chr01: 35644567-35645066 Glycine max
Glyma.01G105500 0.5kb downstream 0.5kb downstream 8737 true Chr01: 35645067-35653803 Glycine max
Glyma.01G105500 0.5kb downstream 0.5kb downstream 500 false Chr01: 35653304-35653803 Glycine max
Glyma.01G105500 1.0kb upstream 1.0kb upstream 9237 true Chr01: 35644067-35653303 Glycine max
Glyma.01G105500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 35644067-35645066 Glycine max
Glyma.01G105500 1.0kb downstream 1.0kb downstream 9237 true Chr01: 35645067-35654303 Glycine max
Glyma.01G105500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 35653304-35654303 Glycine max
Glyma.01G105500 2.0kb upstream 2.0kb upstream 10237 true Chr01: 35643067-35653303 Glycine max
Glyma.01G105500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 35643067-35645066 Glycine max
Glyma.01G105500 2.0kb downstream 2.0kb downstream 10237 true Chr01: 35645067-35655303 Glycine max
Glyma.01G105500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 35653304-35655303 Glycine max
Glyma.01G105500 5.0kb upstream 5.0kb upstream 13237 true Chr01: 35640067-35653303 Glycine max
Glyma.01G105500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 35640067-35645066 Glycine max
Glyma.01G105500 5.0kb downstream 5.0kb downstream 13237 true Chr01: 35645067-35658303 Glycine max
Glyma.01G105500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 35653304-35658303 Glycine max
Glyma.01G105500 10.0kb upstream 10.0kb upstream 18237 true Chr01: 35635067-35653303 Glycine max
Glyma.01G105500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 35635067-35645066 Glycine max
Glyma.01G105500 10.0kb downstream 10.0kb downstream 18237 true Chr01: 35645067-35663303 Glycine max
Glyma.01G105500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 35653304-35663303 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026291 5273 Angiosperm View MSA
122310573 5265 Fabidae View MSA
124069190 5270 Rosid View MSA
123746972 5271 Pentapetalae View MSA
122795211 5272 Eudicot View MSA
121350421 5274 Embryophyte View MSA
123426464 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.6209 0.0 124.95 High  
cufflinks 38.2832 0.0 148.637 High  
cufflinks 28.2684 0.0 109.288 High Low
cufflinks 37.2279 0.0 144.37 High  
cufflinks 48.8477 0.0 193.598 High High
cufflinks 44.1714 0.0 174.74 High  
cufflinks 46.861 0.0 186.719 High High
cufflinks 34.3634 0.0 133.749 High  
cufflinks 38.6607 0.0 151.539 High  
cufflinks 1.126        
cufflinks 0.703       Low
cufflinks 1.07        
cufflinks 2.007       High
cufflinks 2.411       High
cufflinks 0.823        
cufflinks 1.113        
cufflinks 0.717       Low
cufflinks 1.238        
cufflinks 1.323        
cufflinks 1.035        
cufflinks 0.781        
cufflinks 1.065        
cufflinks 1.12        
cufflinks 0.834        
cufflinks 1.064        
cufflinks 0.906        

0 Strain