Gene : Glyma.01G103500 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31384:SF1 - AUXIN RESPONSE FACTOR 12-RELATED Genomic Order:  1035
Name:  ? Glyma.01G103500 Secondary Identifier:  ? PAC:30543085
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G103500 0.5kb upstream 0.5kb upstream 5290 true Chr01: 34600880-34606169 Glycine max
Glyma.01G103500 0.5kb upstream 0.5kb upstream 500 false Chr01: 34605670-34606169 Glycine max
Glyma.01G103500 0.5kb downstream 0.5kb downstream 5290 true Chr01: 34600380-34605669 Glycine max
Glyma.01G103500 0.5kb downstream 0.5kb downstream 500 false Chr01: 34600380-34600879 Glycine max
Glyma.01G103500 1.0kb upstream 1.0kb upstream 5790 true Chr01: 34600880-34606669 Glycine max
Glyma.01G103500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 34605670-34606669 Glycine max
Glyma.01G103500 1.0kb downstream 1.0kb downstream 5790 true Chr01: 34599880-34605669 Glycine max
Glyma.01G103500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 34599880-34600879 Glycine max
Glyma.01G103500 2.0kb upstream 2.0kb upstream 6790 true Chr01: 34600880-34607669 Glycine max
Glyma.01G103500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 34605670-34607669 Glycine max
Glyma.01G103500 2.0kb downstream 2.0kb downstream 6790 true Chr01: 34598880-34605669 Glycine max
Glyma.01G103500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 34598880-34600879 Glycine max
Glyma.01G103500 5.0kb upstream 5.0kb upstream 9790 true Chr01: 34600880-34610669 Glycine max
Glyma.01G103500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 34605670-34610669 Glycine max
Glyma.01G103500 5.0kb downstream 5.0kb downstream 9790 true Chr01: 34595880-34605669 Glycine max
Glyma.01G103500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 34595880-34600879 Glycine max
Glyma.01G103500 10.0kb upstream 10.0kb upstream 14790 true Chr01: 34600880-34615669 Glycine max
Glyma.01G103500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 34605670-34615669 Glycine max
Glyma.01G103500 10.0kb downstream 10.0kb downstream 14790 true Chr01: 34590880-34605669 Glycine max
Glyma.01G103500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 34590880-34600879 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314048 5265 Fabidae View MSA
124070371 5270 Rosid View MSA
123743990 5271 Pentapetalae View MSA
122792006 5272 Eudicot View MSA
122050868 5273 Angiosperm View MSA
121348224 5274 Embryophyte View MSA
123380779 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.9057 0.0 92.0003 High  
cufflinks 23.1705 0.0 88.477 High  
cufflinks 6.64562 0.0 23.5357   Low
cufflinks 6.06139 0.0 21.7128   Low
cufflinks 28.4088 0.0 114.204 High  
cufflinks 52.402 0.0 227.111 High High
cufflinks 6.81727 0.0 24.0003   Low
cufflinks 11.1505 0.0 38.9915    
cufflinks 61.0193 0.0 277.633 High High
cufflinks 2.613       Low
cufflinks 6.752     High  
cufflinks 3.741       Low
cufflinks 11.633     High  
cufflinks 3.852       Low
cufflinks 6.015     High  
cufflinks 12.905     High  
cufflinks 29.392     High High
cufflinks 3.073       Low
cufflinks 14.068     High  
cufflinks 8.035     High  
cufflinks 7.767     High  
cufflinks 12.469     High  
cufflinks 13.82     High  
cufflinks 9.261     High  
cufflinks 9.711     High  
cufflinks 19.151     High High

0 Strain