Gene : Glyma.01G100900 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11215 - METAL DEPENDENT HYDROLASE - RELATED Genomic Order:  1009
Name:  ? Glyma.01G100900 Secondary Identifier:  ? PAC:30544147
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G100900 0.5kb upstream 0.5kb upstream 9735 true Chr01: 33500142-33509876 Glycine max
Glyma.01G100900 0.5kb upstream 0.5kb upstream 500 false Chr01: 33500142-33500641 Glycine max
Glyma.01G100900 0.5kb downstream 0.5kb downstream 9735 true Chr01: 33500642-33510376 Glycine max
Glyma.01G100900 0.5kb downstream 0.5kb downstream 500 false Chr01: 33509877-33510376 Glycine max
Glyma.01G100900 1.0kb upstream 1.0kb upstream 10235 true Chr01: 33499642-33509876 Glycine max
Glyma.01G100900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 33499642-33500641 Glycine max
Glyma.01G100900 1.0kb downstream 1.0kb downstream 10235 true Chr01: 33500642-33510876 Glycine max
Glyma.01G100900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 33509877-33510876 Glycine max
Glyma.01G100900 2.0kb upstream 2.0kb upstream 11235 true Chr01: 33498642-33509876 Glycine max
Glyma.01G100900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 33498642-33500641 Glycine max
Glyma.01G100900 2.0kb downstream 2.0kb downstream 11235 true Chr01: 33500642-33511876 Glycine max
Glyma.01G100900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 33509877-33511876 Glycine max
Glyma.01G100900 5.0kb upstream 5.0kb upstream 14235 true Chr01: 33495642-33509876 Glycine max
Glyma.01G100900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 33495642-33500641 Glycine max
Glyma.01G100900 5.0kb downstream 5.0kb downstream 14235 true Chr01: 33500642-33514876 Glycine max
Glyma.01G100900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 33509877-33514876 Glycine max
Glyma.01G100900 10.0kb upstream 10.0kb upstream 19235 true Chr01: 33490642-33509876 Glycine max
Glyma.01G100900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 33490642-33500641 Glycine max
Glyma.01G100900 10.0kb downstream 10.0kb downstream 19235 true Chr01: 33500642-33519876 Glycine max
Glyma.01G100900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 33509877-33519876 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308499 5265 Fabidae View MSA
124060891 5270 Rosid View MSA
123741833 5271 Pentapetalae View MSA
122789735 5272 Eudicot View MSA
122041582 5273 Angiosperm View MSA
121346472 5274 Embryophyte View MSA
123423927 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.4479 0.0 113.94 High High
cufflinks 15.1897 0.0 67.35    
cufflinks 8.7775 0.0 28.2692   Low
cufflinks 11.148 0.0 51.3722   Low
cufflinks 22.1106 0.0 96.4602 High  
cufflinks 18.6788 0.0 82.5471    
cufflinks 21.93 0.0 94.0846 High  
cufflinks 14.3656 0.0 43.4373    
cufflinks 19.518 0.0 87.2078    
cufflinks 1.344        
cufflinks 0.549       Low
cufflinks 1.37        
cufflinks 3.233       High
cufflinks 4.386       High
cufflinks 1.106        
cufflinks 1.627        
cufflinks 0.917        
cufflinks 1.375        
cufflinks 1.908        
cufflinks 1.231        
cufflinks 0.883        
cufflinks 1.551        
cufflinks 1.754        
cufflinks 0.63       Low
cufflinks 1.676        
cufflinks 1.056        

0 Strain