Gene : Glyma.01G102400 G. max Wm82.a2.v1
Defline:  (1 of 83) PF04535 - Domain of unknown function (DUF588) (DUF588) Genomic Order:  1024
Name:  ? Glyma.01G102400 Secondary Identifier:  ? PAC:30544901
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G102400 0.5kb upstream 0.5kb upstream 4340 true Chr01: 34111444-34115783 Glycine max
Glyma.01G102400 0.5kb upstream 0.5kb upstream 500 false Chr01: 34115284-34115783 Glycine max
Glyma.01G102400 0.5kb downstream 0.5kb downstream 4340 true Chr01: 34110944-34115283 Glycine max
Glyma.01G102400 0.5kb downstream 0.5kb downstream 500 false Chr01: 34110944-34111443 Glycine max
Glyma.01G102400 1.0kb upstream 1.0kb upstream 4840 true Chr01: 34111444-34116283 Glycine max
Glyma.01G102400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 34115284-34116283 Glycine max
Glyma.01G102400 1.0kb downstream 1.0kb downstream 4840 true Chr01: 34110444-34115283 Glycine max
Glyma.01G102400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 34110444-34111443 Glycine max
Glyma.01G102400 2.0kb upstream 2.0kb upstream 5840 true Chr01: 34111444-34117283 Glycine max
Glyma.01G102400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 34115284-34117283 Glycine max
Glyma.01G102400 2.0kb downstream 2.0kb downstream 5840 true Chr01: 34109444-34115283 Glycine max
Glyma.01G102400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 34109444-34111443 Glycine max
Glyma.01G102400 5.0kb upstream 5.0kb upstream 8840 true Chr01: 34111444-34120283 Glycine max
Glyma.01G102400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 34115284-34120283 Glycine max
Glyma.01G102400 5.0kb downstream 5.0kb downstream 8840 true Chr01: 34106444-34115283 Glycine max
Glyma.01G102400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 34106444-34111443 Glycine max
Glyma.01G102400 10.0kb upstream 10.0kb upstream 13840 true Chr01: 34111444-34125283 Glycine max
Glyma.01G102400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 34115284-34125283 Glycine max
Glyma.01G102400 10.0kb downstream 10.0kb downstream 13840 true Chr01: 34101444-34115283 Glycine max
Glyma.01G102400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 34101444-34111443 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299878 5265 Fabidae View MSA
124063057 5270 Rosid View MSA
123740553 5271 Pentapetalae View MSA
122796755 5272 Eudicot View MSA
122043867 5273 Angiosperm View MSA
121310202 5274 Embryophyte View MSA
123347759 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.11943 0.0 21.3404   Low
cufflinks 14.8686 0.0 40.9338    
cufflinks 8.43424 0.0 24.6577   Low
cufflinks 11.6086 0.0 32.6505    
cufflinks 12.9452 0.0 36.0902    
cufflinks 11.1324 0.0 31.5248    
cufflinks 12.7178 0.0 35.4517    
cufflinks 16.5426 0.0 45.1081   High
cufflinks 14.3458 0.0 39.5563    
cufflinks 2.965        
cufflinks 1.635       Low
cufflinks 2.213        
cufflinks 2.864        
cufflinks 3.478        
cufflinks 2.297        
cufflinks 3.145        
cufflinks 1.546       Low
cufflinks 2.786        
cufflinks 3.341        
cufflinks 4.078       High
cufflinks 2.151        
cufflinks 3.96       High
cufflinks 2.557        
cufflinks 1.979        
cufflinks 3.82       High
cufflinks 1.665       Low

0 Strain