Gene : Glyma.01G102200 G. max Wm82.a2.v1
Defline:  (1 of 7) PF04578 - Protein of unknown function, DUF594 (DUF594) Genomic Order:  1022
Name:  ? Glyma.01G102200 Secondary Identifier:  ? PAC:30542738
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G102200 0.5kb upstream 0.5kb upstream 5110 true Chr01: 34079528-34084637 Glycine max
Glyma.01G102200 0.5kb upstream 0.5kb upstream 500 false Chr01: 34079528-34080027 Glycine max
Glyma.01G102200 0.5kb downstream 0.5kb downstream 5110 true Chr01: 34080028-34085137 Glycine max
Glyma.01G102200 0.5kb downstream 0.5kb downstream 500 false Chr01: 34084638-34085137 Glycine max
Glyma.01G102200 1.0kb upstream 1.0kb upstream 5610 true Chr01: 34079028-34084637 Glycine max
Glyma.01G102200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 34079028-34080027 Glycine max
Glyma.01G102200 1.0kb downstream 1.0kb downstream 5610 true Chr01: 34080028-34085637 Glycine max
Glyma.01G102200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 34084638-34085637 Glycine max
Glyma.01G102200 2.0kb upstream 2.0kb upstream 6610 true Chr01: 34078028-34084637 Glycine max
Glyma.01G102200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 34078028-34080027 Glycine max
Glyma.01G102200 2.0kb downstream 2.0kb downstream 6610 true Chr01: 34080028-34086637 Glycine max
Glyma.01G102200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 34084638-34086637 Glycine max
Glyma.01G102200 5.0kb upstream 5.0kb upstream 9610 true Chr01: 34075028-34084637 Glycine max
Glyma.01G102200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 34075028-34080027 Glycine max
Glyma.01G102200 5.0kb downstream 5.0kb downstream 9610 true Chr01: 34080028-34089637 Glycine max
Glyma.01G102200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 34084638-34089637 Glycine max
Glyma.01G102200 10.0kb upstream 10.0kb upstream 14610 true Chr01: 34070028-34084637 Glycine max
Glyma.01G102200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 34070028-34080027 Glycine max
Glyma.01G102200 10.0kb downstream 10.0kb downstream 14610 true Chr01: 34080028-34094637 Glycine max
Glyma.01G102200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 34084638-34094637 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029142 5273 Angiosperm View MSA
122298835 5265 Fabidae View MSA
124074186 5270 Rosid View MSA
123752826 5271 Pentapetalae View MSA
122795885 5272 Eudicot View MSA
121350539 5274 Embryophyte View MSA
123381781 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0425343 0.0 0.173276 Low  
cufflinks 0.110735 0.0 0.434141 Low  
cufflinks 0.0890734 0.0 0.351568 Low  
cufflinks 0.0793682 0.0 0.31496 Low  
cufflinks 0.0272749 0.0 0.114141 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00947715 0.0 0.0434073 Low Low
cufflinks 0.205746 0.0 0.785993 Low High
cufflinks 0.0416585 0.0 0.169718 Low  
cufflinks 0.619       High
cufflinks 0.029     Low  
cufflinks 0.084     Low  
cufflinks 0.031     Low  
cufflinks 0.003     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.218        
cufflinks 0.049     Low  
cufflinks 0.301        
cufflinks 0.06     Low  
cufflinks 0.281        
cufflinks 0.031     Low  
cufflinks 0.31       High
cufflinks 0.156        
cufflinks 0.043     Low  
cufflinks 0.179        
cufflinks 0.018     Low Low

0 Strain