Gene : Glyma.18G233700 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11165//PTHR11165:SF61 - SKP1 Genomic Order:  2337
Name:  ? Glyma.18G233700 Secondary Identifier:  ? PAC:30558248
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G233700 0.5kb upstream 0.5kb upstream 10134 true Chr18: 52230225-52240358 Glycine max
Glyma.18G233700 0.5kb upstream 0.5kb upstream 500 false Chr18: 52239859-52240358 Glycine max
Glyma.18G233700 0.5kb downstream 0.5kb downstream 10134 true Chr18: 52229725-52239858 Glycine max
Glyma.18G233700 0.5kb downstream 0.5kb downstream 500 false Chr18: 52229725-52230224 Glycine max
Glyma.18G233700 1.0kb upstream 1.0kb upstream 10634 true Chr18: 52230225-52240858 Glycine max
Glyma.18G233700 1.0kb upstream 1.0kb upstream 1000 false Chr18: 52239859-52240858 Glycine max
Glyma.18G233700 1.0kb downstream 1.0kb downstream 10634 true Chr18: 52229225-52239858 Glycine max
Glyma.18G233700 1.0kb downstream 1.0kb downstream 1000 false Chr18: 52229225-52230224 Glycine max
Glyma.18G233700 2.0kb upstream 2.0kb upstream 11634 true Chr18: 52230225-52241858 Glycine max
Glyma.18G233700 2.0kb upstream 2.0kb upstream 2000 false Chr18: 52239859-52241858 Glycine max
Glyma.18G233700 2.0kb downstream 2.0kb downstream 11634 true Chr18: 52228225-52239858 Glycine max
Glyma.18G233700 2.0kb downstream 2.0kb downstream 2000 false Chr18: 52228225-52230224 Glycine max
Glyma.18G233700 5.0kb upstream 5.0kb upstream 14634 true Chr18: 52230225-52244858 Glycine max
Glyma.18G233700 5.0kb upstream 5.0kb upstream 5000 false Chr18: 52239859-52244858 Glycine max
Glyma.18G233700 5.0kb downstream 5.0kb downstream 14634 true Chr18: 52225225-52239858 Glycine max
Glyma.18G233700 5.0kb downstream 5.0kb downstream 5000 false Chr18: 52225225-52230224 Glycine max
Glyma.18G233700 10.0kb upstream 10.0kb upstream 19634 true Chr18: 52230225-52249858 Glycine max
Glyma.18G233700 10.0kb upstream 10.0kb upstream 10000 false Chr18: 52239859-52249858 Glycine max
Glyma.18G233700 10.0kb downstream 10.0kb downstream 19634 true Chr18: 52220225-52239858 Glycine max
Glyma.18G233700 10.0kb downstream 10.0kb downstream 10000 false Chr18: 52220225-52230224 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041112 5273 Angiosperm View MSA
122312813 5265 Fabidae View MSA
124072135 5270 Rosid View MSA
123751098 5271 Pentapetalae View MSA
122789409 5272 Eudicot View MSA
121347198 5274 Embryophyte View MSA
123426227 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.17339 0.0 243.106   High
cufflinks 5.11837 0.0 143.935    
cufflinks 8.58876 0.0 390.797   High
cufflinks 4.62622 0.0 161.122    
cufflinks 2.91584 0.0 46.6984   Low
cufflinks 3.98465 0.0 59.1832    
cufflinks 2.58118 0.0 41.3055   Low
cufflinks 4.95404 0.0 102.398    
cufflinks 3.0247 0.0 68.1677    
cufflinks 0.05     Low  
cufflinks 0.063        
cufflinks 0.058     Low  
cufflinks 0.049     Low  
cufflinks 0.049     Low  
cufflinks 0.08        
cufflinks 0.114       High
cufflinks 0.023     Low Low
cufflinks 0.064     Low  
cufflinks 0.076     Low  
cufflinks 0.132       High
cufflinks 0.067        
cufflinks 0.13       High
cufflinks 0.124       High
cufflinks 0.065        
cufflinks 0.129       High
cufflinks 0.045     Low  

0 Strain