Gene : Glyma.01G123400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11730:SF38 - AMMONIUM TRANSPORTER 2 Genomic Order:  1234
Name:  ? Glyma.01G123400 Secondary Identifier:  ? PAC:30543308
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G123400 0.5kb upstream 0.5kb upstream 8109 true Chr01: 42536233-42544341 Glycine max
Glyma.01G123400 0.5kb upstream 0.5kb upstream 500 false Chr01: 42543842-42544341 Glycine max
Glyma.01G123400 0.5kb downstream 0.5kb downstream 8109 true Chr01: 42535733-42543841 Glycine max
Glyma.01G123400 0.5kb downstream 0.5kb downstream 500 false Chr01: 42535733-42536232 Glycine max
Glyma.01G123400 1.0kb upstream 1.0kb upstream 8609 true Chr01: 42536233-42544841 Glycine max
Glyma.01G123400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 42543842-42544841 Glycine max
Glyma.01G123400 1.0kb downstream 1.0kb downstream 8609 true Chr01: 42535233-42543841 Glycine max
Glyma.01G123400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 42535233-42536232 Glycine max
Glyma.01G123400 2.0kb upstream 2.0kb upstream 9609 true Chr01: 42536233-42545841 Glycine max
Glyma.01G123400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 42543842-42545841 Glycine max
Glyma.01G123400 2.0kb downstream 2.0kb downstream 9609 true Chr01: 42534233-42543841 Glycine max
Glyma.01G123400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 42534233-42536232 Glycine max
Glyma.01G123400 5.0kb upstream 5.0kb upstream 12609 true Chr01: 42536233-42548841 Glycine max
Glyma.01G123400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 42543842-42548841 Glycine max
Glyma.01G123400 5.0kb downstream 5.0kb downstream 12609 true Chr01: 42531233-42543841 Glycine max
Glyma.01G123400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 42531233-42536232 Glycine max
Glyma.01G123400 10.0kb upstream 10.0kb upstream 17609 true Chr01: 42536233-42553841 Glycine max
Glyma.01G123400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 42543842-42553841 Glycine max
Glyma.01G123400 10.0kb downstream 10.0kb downstream 17609 true Chr01: 42526233-42543841 Glycine max
Glyma.01G123400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 42526233-42536232 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310224 5265 Fabidae View MSA
124072416 5270 Rosid View MSA
123737751 5271 Pentapetalae View MSA
122794569 5272 Eudicot View MSA
122050479 5273 Angiosperm View MSA
121349558 5274 Embryophyte View MSA
123426943 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.382391 0.0 1.4239    
cufflinks 1.0569 0.0 3.6931    
cufflinks 9.99488 0.0 26.9782   High
cufflinks 0.489672 0.0 1.80078    
cufflinks 1.49621 0.0 5.0201    
cufflinks 2.42791 0.0 7.63804    
cufflinks 0.541277 0.0 1.97613    
cufflinks 0.185527 0.0 0.713835 Low Low
cufflinks 1.12732 0.0 3.90858    
cufflinks 0.049     Low  
cufflinks 0.324        
cufflinks 1.722       High
cufflinks 0.029     Low Low
cufflinks 0.002     Low Low
cufflinks 0.084        
cufflinks 0.429        
cufflinks 0.069        
cufflinks 0.363        
cufflinks 0.23        
cufflinks 0.323        
cufflinks 1.412       High
cufflinks 0.368        
cufflinks 0.122        
cufflinks 0.871        
cufflinks 0.291        
cufflinks 0.317        

0 Strain