Gene : Glyma.01G120400 G. max Wm82.a2.v1
Defline:  (1 of 5) 1.14.99.33 - Delta(12)-fatty acid dehydrogenase / Linoleate Delta-12-fatty acid acetylenase (desaturase) Genomic Order:  1204
Name:  ? Glyma.01G120400 Secondary Identifier:  ? PAC:30544752
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6013 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G120400 0.5kb upstream 0.5kb upstream 4124 true Chr01: 41337074-41341197 Glycine max
Glyma.01G120400 0.5kb upstream 0.5kb upstream 500 false Chr01: 41337074-41337573 Glycine max
Glyma.01G120400 0.5kb downstream 0.5kb downstream 4124 true Chr01: 41337574-41341697 Glycine max
Glyma.01G120400 0.5kb downstream 0.5kb downstream 500 false Chr01: 41341198-41341697 Glycine max
Glyma.01G120400 1.0kb upstream 1.0kb upstream 4624 true Chr01: 41336574-41341197 Glycine max
Glyma.01G120400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 41336574-41337573 Glycine max
Glyma.01G120400 1.0kb downstream 1.0kb downstream 4624 true Chr01: 41337574-41342197 Glycine max
Glyma.01G120400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 41341198-41342197 Glycine max
Glyma.01G120400 2.0kb upstream 2.0kb upstream 5624 true Chr01: 41335574-41341197 Glycine max
Glyma.01G120400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 41335574-41337573 Glycine max
Glyma.01G120400 2.0kb downstream 2.0kb downstream 5624 true Chr01: 41337574-41343197 Glycine max
Glyma.01G120400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 41341198-41343197 Glycine max
Glyma.01G120400 5.0kb upstream 5.0kb upstream 8624 true Chr01: 41332574-41341197 Glycine max
Glyma.01G120400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 41332574-41337573 Glycine max
Glyma.01G120400 5.0kb downstream 5.0kb downstream 8624 true Chr01: 41337574-41346197 Glycine max
Glyma.01G120400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 41341198-41346197 Glycine max
Glyma.01G120400 10.0kb upstream 10.0kb upstream 13624 true Chr01: 41327574-41341197 Glycine max
Glyma.01G120400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 41327574-41337573 Glycine max
Glyma.01G120400 10.0kb downstream 10.0kb downstream 13624 true Chr01: 41337574-41351197 Glycine max
Glyma.01G120400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 41341198-41351197 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311667 5265 Fabidae View MSA
124069335 5270 Rosid View MSA
123752062 5271 Pentapetalae View MSA
122788316 5272 Eudicot View MSA
122045494 5273 Angiosperm View MSA
121344489 5274 Embryophyte View MSA
123426688 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.2762 0.0 59.6569   High
cufflinks 13.0937 0.0 44.8509    
cufflinks 17.9445 0.0 62.1204   High
cufflinks 11.0751 0.0 38.0539    
cufflinks 3.77233 0.0 15.7088    
cufflinks 2.32316 0.0 7.25058   Low
cufflinks 7.41366 0.0 26.4845    
cufflinks 10.4271 0.0 36.0624    
cufflinks 3.4996 0.0 12.6491   Low
cufflinks 16.151     High High
cufflinks 0.722       Low
cufflinks 8.609     High  
cufflinks 2.771        
cufflinks 2.458        
cufflinks 0.308       Low
cufflinks 8.605     High  
cufflinks 7.719     High  
cufflinks 7.861     High  
cufflinks 7.795     High  
cufflinks 6.463        
cufflinks 0.612       Low
cufflinks 8.803     High  
cufflinks 17.46     High High
cufflinks 0.836       Low
cufflinks 6.484        
cufflinks 1.599        

0 Strain