Gene : Glyma.01G141100 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR33593:SF2 - F5O11.5 Genomic Order:  1411
Name:  ? Glyma.01G141100 Secondary Identifier:  ? PAC:30541928
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G141100 0.5kb upstream 0.5kb upstream 2262 true Chr01: 47118254-47120515 Glycine max
Glyma.01G141100 0.5kb upstream 0.5kb upstream 500 false Chr01: 47118254-47118753 Glycine max
Glyma.01G141100 0.5kb downstream 0.5kb downstream 2262 true Chr01: 47118754-47121015 Glycine max
Glyma.01G141100 0.5kb downstream 0.5kb downstream 500 false Chr01: 47120516-47121015 Glycine max
Glyma.01G141100 1.0kb upstream 1.0kb upstream 2762 true Chr01: 47117754-47120515 Glycine max
Glyma.01G141100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 47117754-47118753 Glycine max
Glyma.01G141100 1.0kb downstream 1.0kb downstream 2762 true Chr01: 47118754-47121515 Glycine max
Glyma.01G141100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 47120516-47121515 Glycine max
Glyma.01G141100 2.0kb upstream 2.0kb upstream 3762 true Chr01: 47116754-47120515 Glycine max
Glyma.01G141100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 47116754-47118753 Glycine max
Glyma.01G141100 2.0kb downstream 2.0kb downstream 3762 true Chr01: 47118754-47122515 Glycine max
Glyma.01G141100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 47120516-47122515 Glycine max
Glyma.01G141100 5.0kb upstream 5.0kb upstream 6762 true Chr01: 47113754-47120515 Glycine max
Glyma.01G141100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 47113754-47118753 Glycine max
Glyma.01G141100 5.0kb downstream 5.0kb downstream 6762 true Chr01: 47118754-47125515 Glycine max
Glyma.01G141100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 47120516-47125515 Glycine max
Glyma.01G141100 10.0kb upstream 10.0kb upstream 11762 true Chr01: 47108754-47120515 Glycine max
Glyma.01G141100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 47108754-47118753 Glycine max
Glyma.01G141100 10.0kb downstream 10.0kb downstream 11762 true Chr01: 47118754-47130515 Glycine max
Glyma.01G141100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 47120516-47130515 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041482 5273 Angiosperm View MSA
122300123 5265 Fabidae View MSA
124070642 5270 Rosid View MSA
123743657 5271 Pentapetalae View MSA
122790548 5272 Eudicot View MSA
121348528 5274 Embryophyte View MSA
123380900 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.141043 0.0 0.560408 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00958724 0.0 0.0684143 Low Low
cufflinks 2.96559 0.0 15.8639    
cufflinks 11.7102 0.0 44.2393   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.17191 0.0 10.8511    
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 24.251     High High
cufflinks 0.003     Low Low
cufflinks 0.561        
cufflinks 0.636        
cufflinks 2.262        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.788        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 18.41     High  
cufflinks 0.003     Low Low
cufflinks 0.03     Low  
cufflinks 28.151     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 14.746     High  

0 Strain