Gene : Glyma.01G140600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR21292:SF1 - EXOCYST COMPLEX COMPONENT 3 Genomic Order:  1406
Name:  ? Glyma.01G140600 Secondary Identifier:  ? PAC:30544729
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G140600 0.5kb upstream 0.5kb upstream 31227 true Chr01: 46925091-46956317 Glycine max
Glyma.01G140600 0.5kb upstream 0.5kb upstream 500 false Chr01: 46955818-46956317 Glycine max
Glyma.01G140600 0.5kb downstream 0.5kb downstream 31227 true Chr01: 46924591-46955817 Glycine max
Glyma.01G140600 0.5kb downstream 0.5kb downstream 500 false Chr01: 46924591-46925090 Glycine max
Glyma.01G140600 1.0kb upstream 1.0kb upstream 31727 true Chr01: 46925091-46956817 Glycine max
Glyma.01G140600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 46955818-46956817 Glycine max
Glyma.01G140600 1.0kb downstream 1.0kb downstream 31727 true Chr01: 46924091-46955817 Glycine max
Glyma.01G140600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 46924091-46925090 Glycine max
Glyma.01G140600 2.0kb upstream 2.0kb upstream 32727 true Chr01: 46925091-46957817 Glycine max
Glyma.01G140600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 46955818-46957817 Glycine max
Glyma.01G140600 2.0kb downstream 2.0kb downstream 32727 true Chr01: 46923091-46955817 Glycine max
Glyma.01G140600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 46923091-46925090 Glycine max
Glyma.01G140600 5.0kb upstream 5.0kb upstream 35727 true Chr01: 46925091-46960817 Glycine max
Glyma.01G140600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 46955818-46960817 Glycine max
Glyma.01G140600 5.0kb downstream 5.0kb downstream 35727 true Chr01: 46920091-46955817 Glycine max
Glyma.01G140600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 46920091-46925090 Glycine max
Glyma.01G140600 10.0kb upstream 10.0kb upstream 40727 true Chr01: 46925091-46965817 Glycine max
Glyma.01G140600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 46955818-46965817 Glycine max
Glyma.01G140600 10.0kb downstream 10.0kb downstream 40727 true Chr01: 46915091-46955817 Glycine max
Glyma.01G140600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 46915091-46925090 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041520 5273 Angiosperm View MSA
122298987 5265 Fabidae View MSA
124071229 5270 Rosid View MSA
123743755 5271 Pentapetalae View MSA
122792877 5272 Eudicot View MSA
121344571 5274 Embryophyte View MSA
123427999 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.72764 0.0 24.5742    
cufflinks 4.91404 0.0 27.6978    
cufflinks 4.82407 0.0 24.7015    
cufflinks 4.83789 0.0 27.2013    
cufflinks 7.01192 0.0 36.5041   High
cufflinks 4.73097 0.0 25.4058    
cufflinks 3.79919 0.0 19.271   Low
cufflinks 7.12694 0.0 35.6386   High
cufflinks 4.69484 0.0 22.5754    
cufflinks 0.067     Low  
cufflinks 0.063        
cufflinks 0.062     Low  
cufflinks 0.096       High
cufflinks 0.107       High
cufflinks 0.088       High
cufflinks 0.057     Low  
cufflinks 0.038     Low Low
cufflinks 0.081     Low  
cufflinks 0.07     Low  
cufflinks 0.068     Low  
cufflinks 0.068        
cufflinks 0.065     Low  
cufflinks 0.062     Low  
cufflinks 0.062        
cufflinks 0.061     Low  
cufflinks 0.051     Low Low

0 Strain