Gene : Glyma.18G234000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12705 - ORIGIN RECOGNITION COMPLEX SUBUNIT 5 Genomic Order:  2340
Name:  ? Glyma.18G234000 Secondary Identifier:  ? PAC:30555307
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G234000 0.5kb upstream 0.5kb upstream 3927 true Chr18: 52246538-52250464 Glycine max
Glyma.18G234000 0.5kb upstream 0.5kb upstream 500 false Chr18: 52249965-52250464 Glycine max
Glyma.18G234000 0.5kb downstream 0.5kb downstream 3927 true Chr18: 52246038-52249964 Glycine max
Glyma.18G234000 0.5kb downstream 0.5kb downstream 500 false Chr18: 52246038-52246537 Glycine max
Glyma.18G234000 1.0kb upstream 1.0kb upstream 4427 true Chr18: 52246538-52250964 Glycine max
Glyma.18G234000 1.0kb upstream 1.0kb upstream 1000 false Chr18: 52249965-52250964 Glycine max
Glyma.18G234000 1.0kb downstream 1.0kb downstream 4427 true Chr18: 52245538-52249964 Glycine max
Glyma.18G234000 1.0kb downstream 1.0kb downstream 1000 false Chr18: 52245538-52246537 Glycine max
Glyma.18G234000 2.0kb upstream 2.0kb upstream 5427 true Chr18: 52246538-52251964 Glycine max
Glyma.18G234000 2.0kb upstream 2.0kb upstream 2000 false Chr18: 52249965-52251964 Glycine max
Glyma.18G234000 2.0kb downstream 2.0kb downstream 5427 true Chr18: 52244538-52249964 Glycine max
Glyma.18G234000 2.0kb downstream 2.0kb downstream 2000 false Chr18: 52244538-52246537 Glycine max
Glyma.18G234000 5.0kb upstream 5.0kb upstream 8427 true Chr18: 52246538-52254964 Glycine max
Glyma.18G234000 5.0kb upstream 5.0kb upstream 5000 false Chr18: 52249965-52254964 Glycine max
Glyma.18G234000 5.0kb downstream 5.0kb downstream 8427 true Chr18: 52241538-52249964 Glycine max
Glyma.18G234000 5.0kb downstream 5.0kb downstream 5000 false Chr18: 52241538-52246537 Glycine max
Glyma.18G234000 10.0kb upstream 10.0kb upstream 13427 true Chr18: 52246538-52259964 Glycine max
Glyma.18G234000 10.0kb upstream 10.0kb upstream 10000 false Chr18: 52249965-52259964 Glycine max
Glyma.18G234000 10.0kb downstream 10.0kb downstream 13427 true Chr18: 52236538-52249964 Glycine max
Glyma.18G234000 10.0kb downstream 10.0kb downstream 10000 false Chr18: 52236538-52246537 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308121 5265 Fabidae View MSA
124063639 5270 Rosid View MSA
123738989 5271 Pentapetalae View MSA
122792366 5272 Eudicot View MSA
122046097 5273 Angiosperm View MSA
121344554 5274 Embryophyte View MSA
123425220 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.906972 0.0 5.94053   Low
cufflinks 5.45659 0.0 21.2659   High
cufflinks 0.939661 0.0 4.91646   Low
cufflinks 1.7462 0.0 9.71833    
cufflinks 2.38632 0.0 12.3366    
cufflinks 1.77712 0.0 8.01585    
cufflinks 2.11165 0.0 11.2228    
cufflinks 1.9775 0.0 11.2634    
cufflinks 3.28153 0.0 14.7921    
cufflinks 0.539        
cufflinks 0.039     Low Low
cufflinks 0.518        
cufflinks 1.033        
cufflinks 1.311       High
cufflinks 0.111        
cufflinks 0.461        
cufflinks 0.161        
cufflinks 0.48        
cufflinks 2.36       High
cufflinks 0.381        
cufflinks 0.069       Low
cufflinks 0.484        
cufflinks 1.268       High
cufflinks 0.049     Low Low
cufflinks 0.474        
cufflinks 0.114        

0 Strain