Gene : Glyma.01G147800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12136:SF47 - STEROIDOGENIC ACUTE REGULATORY-LIKE PROTEIN 1 Genomic Order:  1478
Name:  ? Glyma.01G147800 Secondary Identifier:  ? PAC:30544506
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G147800 0.5kb upstream 0.5kb upstream 20010 true Chr01: 48485290-48505299 Glycine max
Glyma.01G147800 0.5kb upstream 0.5kb upstream 500 false Chr01: 48504800-48505299 Glycine max
Glyma.01G147800 0.5kb downstream 0.5kb downstream 20010 true Chr01: 48484790-48504799 Glycine max
Glyma.01G147800 0.5kb downstream 0.5kb downstream 500 false Chr01: 48484790-48485289 Glycine max
Glyma.01G147800 1.0kb upstream 1.0kb upstream 20510 true Chr01: 48485290-48505799 Glycine max
Glyma.01G147800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 48504800-48505799 Glycine max
Glyma.01G147800 1.0kb downstream 1.0kb downstream 20510 true Chr01: 48484290-48504799 Glycine max
Glyma.01G147800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 48484290-48485289 Glycine max
Glyma.01G147800 2.0kb upstream 2.0kb upstream 21510 true Chr01: 48485290-48506799 Glycine max
Glyma.01G147800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 48504800-48506799 Glycine max
Glyma.01G147800 2.0kb downstream 2.0kb downstream 21510 true Chr01: 48483290-48504799 Glycine max
Glyma.01G147800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 48483290-48485289 Glycine max
Glyma.01G147800 5.0kb upstream 5.0kb upstream 24510 true Chr01: 48485290-48509799 Glycine max
Glyma.01G147800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 48504800-48509799 Glycine max
Glyma.01G147800 5.0kb downstream 5.0kb downstream 24510 true Chr01: 48480290-48504799 Glycine max
Glyma.01G147800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 48480290-48485289 Glycine max
Glyma.01G147800 10.0kb upstream 10.0kb upstream 29510 true Chr01: 48485290-48514799 Glycine max
Glyma.01G147800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 48504800-48514799 Glycine max
Glyma.01G147800 10.0kb downstream 10.0kb downstream 29510 true Chr01: 48475290-48504799 Glycine max
Glyma.01G147800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 48475290-48485289 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305465 5265 Fabidae View MSA
124064878 5270 Rosid View MSA
123737179 5271 Pentapetalae View MSA
122789263 5272 Eudicot View MSA
122042649 5273 Angiosperm View MSA
121346561 5274 Embryophyte View MSA
123428121 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.0761 0.0 38.4823   High
cufflinks 5.96821 0.0 23.9391   Low
cufflinks 8.89329 0.0 33.8824   High
cufflinks 6.49491 0.0 25.3569    
cufflinks 6.78031 0.0 26.5159    
cufflinks 6.54085 0.0 25.4804    
cufflinks 5.81091 0.0 23.1906   Low
cufflinks 7.78162 0.0 29.9013    
cufflinks 8.14837 0.0 31.3272    
cufflinks 0.277        
cufflinks 0.795       High
cufflinks 0.358        
cufflinks 0.292        
cufflinks 0.253        
cufflinks 0.583       High
cufflinks 0.26        
cufflinks 0.38        
cufflinks 0.326        
cufflinks 0.298        
cufflinks 0.294        
cufflinks 0.721       High
cufflinks 0.326        
cufflinks 0.243       Low
cufflinks 0.722       High
cufflinks 0.28        
cufflinks 0.486        

0 Strain