Gene : Glyma.01G144700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR33601:SF1 - LITTLE ZIPPER 1 PROTEIN-RELATED Genomic Order:  1447
Name:  ? Glyma.01G144700 Secondary Identifier:  ? PAC:30542275
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G144700 0.5kb upstream 0.5kb upstream 2146 true Chr01: 47920017-47922162 Glycine max
Glyma.01G144700 0.5kb upstream 0.5kb upstream 500 false Chr01: 47921663-47922162 Glycine max
Glyma.01G144700 0.5kb downstream 0.5kb downstream 2146 true Chr01: 47919517-47921662 Glycine max
Glyma.01G144700 0.5kb downstream 0.5kb downstream 500 false Chr01: 47919517-47920016 Glycine max
Glyma.01G144700 1.0kb upstream 1.0kb upstream 2646 true Chr01: 47920017-47922662 Glycine max
Glyma.01G144700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 47921663-47922662 Glycine max
Glyma.01G144700 1.0kb downstream 1.0kb downstream 2646 true Chr01: 47919017-47921662 Glycine max
Glyma.01G144700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 47919017-47920016 Glycine max
Glyma.01G144700 2.0kb upstream 2.0kb upstream 3646 true Chr01: 47920017-47923662 Glycine max
Glyma.01G144700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 47921663-47923662 Glycine max
Glyma.01G144700 2.0kb downstream 2.0kb downstream 3646 true Chr01: 47918017-47921662 Glycine max
Glyma.01G144700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 47918017-47920016 Glycine max
Glyma.01G144700 5.0kb upstream 5.0kb upstream 6646 true Chr01: 47920017-47926662 Glycine max
Glyma.01G144700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 47921663-47926662 Glycine max
Glyma.01G144700 5.0kb downstream 5.0kb downstream 6646 true Chr01: 47915017-47921662 Glycine max
Glyma.01G144700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 47915017-47920016 Glycine max
Glyma.01G144700 10.0kb upstream 10.0kb upstream 11646 true Chr01: 47920017-47931662 Glycine max
Glyma.01G144700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 47921663-47931662 Glycine max
Glyma.01G144700 10.0kb downstream 10.0kb downstream 11646 true Chr01: 47910017-47921662 Glycine max
Glyma.01G144700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 47910017-47920016 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041483 5273 Angiosperm View MSA
122254691 5265 Fabidae View MSA
124070399 5270 Rosid View MSA
123743735 5271 Pentapetalae View MSA
122787347 5272 Eudicot View MSA
121309855 5274 Embryophyte View MSA
123347500 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.03434 0.0 7.23161    
cufflinks 2.50931 0.0 8.74518    
cufflinks 0.269917 0.0 1.0579   Low
cufflinks 0.319923 0.0 1.24672   Low
cufflinks 1.93355 0.0 6.90586    
cufflinks 3.70465 0.0 12.4236   High
cufflinks 0.191086 0.0 0.760598 Low Low
cufflinks 1.21211 0.0 4.44153    
cufflinks 2.88063 0.0 9.91545    
cufflinks 0.104        
cufflinks 2.258       High
cufflinks 0.372        
cufflinks 0.021     Low Low
cufflinks 0.055     Low Low
cufflinks 0.248        
cufflinks 0.093     Low  
cufflinks 0.376        
cufflinks 0.099     Low  
cufflinks 0.663        
cufflinks 0.266        
cufflinks 2.073       High
cufflinks 0.285        
cufflinks 0.168        
cufflinks 3.258       High
cufflinks 0.199        
cufflinks 0.726        

0 Strain