Gene : Glyma.01G148900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR22870//PTHR22870:SF190 - REGULATOR OF CHROMOSOME CONDENSATION Genomic Order:  1489
Name:  ? Glyma.01G148900 Secondary Identifier:  ? PAC:30542324
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G148900 0.5kb upstream 0.5kb upstream 7840 true Chr01: 48592215-48600054 Glycine max
Glyma.01G148900 0.5kb upstream 0.5kb upstream 500 false Chr01: 48592215-48592714 Glycine max
Glyma.01G148900 0.5kb downstream 0.5kb downstream 7840 true Chr01: 48592715-48600554 Glycine max
Glyma.01G148900 0.5kb downstream 0.5kb downstream 500 false Chr01: 48600055-48600554 Glycine max
Glyma.01G148900 1.0kb upstream 1.0kb upstream 8340 true Chr01: 48591715-48600054 Glycine max
Glyma.01G148900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 48591715-48592714 Glycine max
Glyma.01G148900 1.0kb downstream 1.0kb downstream 8340 true Chr01: 48592715-48601054 Glycine max
Glyma.01G148900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 48600055-48601054 Glycine max
Glyma.01G148900 2.0kb upstream 2.0kb upstream 9340 true Chr01: 48590715-48600054 Glycine max
Glyma.01G148900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 48590715-48592714 Glycine max
Glyma.01G148900 2.0kb downstream 2.0kb downstream 9340 true Chr01: 48592715-48602054 Glycine max
Glyma.01G148900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 48600055-48602054 Glycine max
Glyma.01G148900 5.0kb upstream 5.0kb upstream 12340 true Chr01: 48587715-48600054 Glycine max
Glyma.01G148900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 48587715-48592714 Glycine max
Glyma.01G148900 5.0kb downstream 5.0kb downstream 12340 true Chr01: 48592715-48605054 Glycine max
Glyma.01G148900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 48600055-48605054 Glycine max
Glyma.01G148900 10.0kb upstream 10.0kb upstream 17340 true Chr01: 48582715-48600054 Glycine max
Glyma.01G148900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 48582715-48592714 Glycine max
Glyma.01G148900 10.0kb downstream 10.0kb downstream 17340 true Chr01: 48592715-48610054 Glycine max
Glyma.01G148900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 48600055-48610054 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253873 5265 Fabidae View MSA
123996281 5270 Rosid View MSA
123570782 5271 Pentapetalae View MSA
122605516 5272 Eudicot View MSA
122046038 5273 Angiosperm View MSA
121349129 5274 Embryophyte View MSA
123381183 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.181067 0.0 1.51024 Low Low
cufflinks 2.10945 0.0 10.7384   High
cufflinks 1.14404 0.0 7.41713    
cufflinks 0.745693 0.0 7.66695    
cufflinks 0.246554 0.0 1.948    
cufflinks 0.212423 0.0 1.0421 Low Low
cufflinks 2.99858 0.0 15.6687   High
cufflinks 1.73373 0.0 11.9992    
cufflinks 0.321289 0.0 2.25696    
cufflinks 0.086     Low  
cufflinks 0.044     Low  
cufflinks 0.091     Low  
cufflinks 0.042     Low  
cufflinks 0.007     Low Low
cufflinks 0.004     Low Low
cufflinks 0.06     Low  
cufflinks 0.045     Low  
cufflinks 0.123       High
cufflinks 0.194       High
cufflinks 0.082     Low  
cufflinks 0.05     Low  
cufflinks 0.066     Low  
cufflinks 0.06     Low  
cufflinks 0.024     Low  
cufflinks 0.063     Low  
cufflinks 0.046     Low  

0 Strain