Gene : Glyma.01G020200 G. max Wm82.a2.v1
Defline:  (1 of 2) K05752 - chromosome 3 open reading frame 10 Genomic Order:  202
Name:  ? Glyma.01G020200 Secondary Identifier:  ? PAC:30542340
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G020200 0.5kb upstream 0.5kb upstream 1682 true Chr01: 2009725-2011406 Glycine max
Glyma.01G020200 0.5kb upstream 0.5kb upstream 500 false Chr01: 2010907-2011406 Glycine max
Glyma.01G020200 0.5kb downstream 0.5kb downstream 1682 true Chr01: 2009225-2010906 Glycine max
Glyma.01G020200 0.5kb downstream 0.5kb downstream 500 false Chr01: 2009225-2009724 Glycine max
Glyma.01G020200 1.0kb upstream 1.0kb upstream 2182 true Chr01: 2009725-2011906 Glycine max
Glyma.01G020200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 2010907-2011906 Glycine max
Glyma.01G020200 1.0kb downstream 1.0kb downstream 2182 true Chr01: 2008725-2010906 Glycine max
Glyma.01G020200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 2008725-2009724 Glycine max
Glyma.01G020200 2.0kb upstream 2.0kb upstream 3182 true Chr01: 2009725-2012906 Glycine max
Glyma.01G020200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 2010907-2012906 Glycine max
Glyma.01G020200 2.0kb downstream 2.0kb downstream 3182 true Chr01: 2007725-2010906 Glycine max
Glyma.01G020200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 2007725-2009724 Glycine max
Glyma.01G020200 5.0kb upstream 5.0kb upstream 6182 true Chr01: 2009725-2015906 Glycine max
Glyma.01G020200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 2010907-2015906 Glycine max
Glyma.01G020200 5.0kb downstream 5.0kb downstream 6182 true Chr01: 2004725-2010906 Glycine max
Glyma.01G020200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 2004725-2009724 Glycine max
Glyma.01G020200 10.0kb upstream 10.0kb upstream 11182 true Chr01: 2009725-2020906 Glycine max
Glyma.01G020200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 2010907-2020906 Glycine max
Glyma.01G020200 10.0kb downstream 10.0kb downstream 11182 true Chr01: 1999725-2010906 Glycine max
Glyma.01G020200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 1999725-2009724 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305006 5265 Fabidae View MSA
124051100 5270 Rosid View MSA
123747984 5271 Pentapetalae View MSA
122786023 5272 Eudicot View MSA
122047228 5273 Angiosperm View MSA
121347694 5274 Embryophyte View MSA
123380603 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.87481 0.0 18.4521    
cufflinks 7.39314 0.0 22.426    
cufflinks 4.32969 0.0 14.1565   Low
cufflinks 10.1069 0.0 29.4245    
cufflinks 8.01236 0.0 24.0009    
cufflinks 14.4535 0.0 40.2992   High
cufflinks 4.85348 0.0 15.6764    
cufflinks 17.5053 0.0 48.0759   High
cufflinks 5.90548 0.0 18.4704    
cufflinks 14.64     High High
cufflinks 4.968        
cufflinks 3.929        
cufflinks 7.415     High  
cufflinks 7.172     High  
cufflinks 1.1       Low
cufflinks 11.247     High  
cufflinks 4.261        
cufflinks 5.402        
cufflinks 6.437        
cufflinks 9.252     High  
cufflinks 9.222     High  
cufflinks 9.752     High  
cufflinks 8.41     High  
cufflinks 5.976        
cufflinks 10.29     High  
cufflinks 5.44        

0 Strain