Gene : Glyma.18G226600 G. max Wm82.a2.v1
Defline:  (1 of 22) PTHR33103:SF4 - EMB Genomic Order:  2266
Name:  ? Glyma.18G226600 Secondary Identifier:  ? PAC:30555555
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G226600 0.5kb upstream 0.5kb upstream 3318 true Chr18: 51568573-51571890 Glycine max
Glyma.18G226600 0.5kb upstream 0.5kb upstream 500 false Chr18: 51571391-51571890 Glycine max
Glyma.18G226600 0.5kb downstream 0.5kb downstream 3318 true Chr18: 51568073-51571390 Glycine max
Glyma.18G226600 0.5kb downstream 0.5kb downstream 500 false Chr18: 51568073-51568572 Glycine max
Glyma.18G226600 1.0kb upstream 1.0kb upstream 3818 true Chr18: 51568573-51572390 Glycine max
Glyma.18G226600 1.0kb upstream 1.0kb upstream 1000 false Chr18: 51571391-51572390 Glycine max
Glyma.18G226600 1.0kb downstream 1.0kb downstream 3818 true Chr18: 51567573-51571390 Glycine max
Glyma.18G226600 1.0kb downstream 1.0kb downstream 1000 false Chr18: 51567573-51568572 Glycine max
Glyma.18G226600 2.0kb upstream 2.0kb upstream 4818 true Chr18: 51568573-51573390 Glycine max
Glyma.18G226600 2.0kb upstream 2.0kb upstream 2000 false Chr18: 51571391-51573390 Glycine max
Glyma.18G226600 2.0kb downstream 2.0kb downstream 4818 true Chr18: 51566573-51571390 Glycine max
Glyma.18G226600 2.0kb downstream 2.0kb downstream 2000 false Chr18: 51566573-51568572 Glycine max
Glyma.18G226600 5.0kb upstream 5.0kb upstream 7818 true Chr18: 51568573-51576390 Glycine max
Glyma.18G226600 5.0kb upstream 5.0kb upstream 5000 false Chr18: 51571391-51576390 Glycine max
Glyma.18G226600 5.0kb downstream 5.0kb downstream 7818 true Chr18: 51563573-51571390 Glycine max
Glyma.18G226600 5.0kb downstream 5.0kb downstream 5000 false Chr18: 51563573-51568572 Glycine max
Glyma.18G226600 10.0kb upstream 10.0kb upstream 12818 true Chr18: 51568573-51581390 Glycine max
Glyma.18G226600 10.0kb upstream 10.0kb upstream 10000 false Chr18: 51571391-51581390 Glycine max
Glyma.18G226600 10.0kb downstream 10.0kb downstream 12818 true Chr18: 51558573-51571390 Glycine max
Glyma.18G226600 10.0kb downstream 10.0kb downstream 10000 false Chr18: 51558573-51568572 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029295 5273 Angiosperm View MSA
122255035 5265 Fabidae View MSA
124073247 5270 Rosid View MSA
123752528 5271 Pentapetalae View MSA
122797868 5272 Eudicot View MSA
121350471 5274 Embryophyte View MSA
123381749 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.12344 0.0 6.71598    
cufflinks 5.80215 0.0 16.1209   High
cufflinks 1.46835 0.0 4.85217    
cufflinks 4.02879 0.0 11.6213   High
cufflinks 0.931687 0.0 3.25751    
cufflinks 0.27861 0.0 1.0474 Low Low
cufflinks 0.746713 0.0 2.65885    
cufflinks 2.80001 0.0 8.4884    
cufflinks 0.342063 0.0 1.27383   Low
cufflinks 3.604        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.543        
cufflinks 0.775        
cufflinks 0.787        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 6.204        
cufflinks 0.106       Low
cufflinks 7.162        
cufflinks 4.196        
cufflinks 5.985        
cufflinks 0.032     Low Low
cufflinks 7.682     High  
cufflinks 10.117     High  
cufflinks 0.026     Low Low
cufflinks 6.619        
cufflinks 0.05     Low Low

0 Strain