Gene : Glyma.01G029500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10044:SF108 - S-RIBONUCLEASE BINDING PROTEIN SBP1-RELATED Genomic Order:  295
Name:  ? Glyma.01G029500 Secondary Identifier:  ? PAC:30544378
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G029500 0.5kb upstream 0.5kb upstream 5222 true Chr01: 3130278-3135499 Glycine max
Glyma.01G029500 0.5kb upstream 0.5kb upstream 500 false Chr01: 3130278-3130777 Glycine max
Glyma.01G029500 0.5kb downstream 0.5kb downstream 5222 true Chr01: 3130778-3135999 Glycine max
Glyma.01G029500 0.5kb downstream 0.5kb downstream 500 false Chr01: 3135500-3135999 Glycine max
Glyma.01G029500 1.0kb upstream 1.0kb upstream 5722 true Chr01: 3129778-3135499 Glycine max
Glyma.01G029500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 3129778-3130777 Glycine max
Glyma.01G029500 1.0kb downstream 1.0kb downstream 5722 true Chr01: 3130778-3136499 Glycine max
Glyma.01G029500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 3135500-3136499 Glycine max
Glyma.01G029500 2.0kb upstream 2.0kb upstream 6722 true Chr01: 3128778-3135499 Glycine max
Glyma.01G029500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 3128778-3130777 Glycine max
Glyma.01G029500 2.0kb downstream 2.0kb downstream 6722 true Chr01: 3130778-3137499 Glycine max
Glyma.01G029500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 3135500-3137499 Glycine max
Glyma.01G029500 5.0kb upstream 5.0kb upstream 9722 true Chr01: 3125778-3135499 Glycine max
Glyma.01G029500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 3125778-3130777 Glycine max
Glyma.01G029500 5.0kb downstream 5.0kb downstream 9722 true Chr01: 3130778-3140499 Glycine max
Glyma.01G029500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 3135500-3140499 Glycine max
Glyma.01G029500 10.0kb upstream 10.0kb upstream 14722 true Chr01: 3120778-3135499 Glycine max
Glyma.01G029500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 3120778-3130777 Glycine max
Glyma.01G029500 10.0kb downstream 10.0kb downstream 14722 true Chr01: 3130778-3145499 Glycine max
Glyma.01G029500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 3135500-3145499 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304703 5265 Fabidae View MSA
124071738 5270 Rosid View MSA
123752259 5271 Pentapetalae View MSA
122794971 5272 Eudicot View MSA
122050089 5273 Angiosperm View MSA
121348016 5274 Embryophyte View MSA
123380706 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.18473 0.0 29.466    
cufflinks 4.21664 0.0 20.9934    
cufflinks 2.96971 0.0 14.3228   Low
cufflinks 6.20125 0.0 25.9241    
cufflinks 8.25395 0.0 33.6529    
cufflinks 17.362 0.0 76.2188   High
cufflinks 5.46891 0.0 30.0353    
cufflinks 8.10419 0.0 39.1762    
cufflinks 7.51534 0.0 35.5774    
cufflinks 0.571        
cufflinks 0.751        
cufflinks 0.381       Low
cufflinks 1.056       High
cufflinks 0.868       High
cufflinks 0.611        
cufflinks 0.427       Low
cufflinks 0.48        
cufflinks 0.553        
cufflinks 0.498        
cufflinks 0.462        
cufflinks 0.885       High
cufflinks 0.508        
cufflinks 0.446        
cufflinks 0.772        
cufflinks 0.49        
cufflinks 0.764        

0 Strain