Gene : Glyma.01G025400 G. max Wm82.a2.v1
Defline:  (1 of 354) PF00847 - AP2 domain (AP2) Genomic Order:  254
Name:  ? Glyma.01G025400 Secondary Identifier:  ? PAC:30542974
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G025400 0.5kb upstream 0.5kb upstream 2049 true Chr01: 2683220-2685268 Glycine max
Glyma.01G025400 0.5kb upstream 0.5kb upstream 500 false Chr01: 2683220-2683719 Glycine max
Glyma.01G025400 0.5kb downstream 0.5kb downstream 2049 true Chr01: 2683720-2685768 Glycine max
Glyma.01G025400 0.5kb downstream 0.5kb downstream 500 false Chr01: 2685269-2685768 Glycine max
Glyma.01G025400 1.0kb upstream 1.0kb upstream 2549 true Chr01: 2682720-2685268 Glycine max
Glyma.01G025400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 2682720-2683719 Glycine max
Glyma.01G025400 1.0kb downstream 1.0kb downstream 2549 true Chr01: 2683720-2686268 Glycine max
Glyma.01G025400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 2685269-2686268 Glycine max
Glyma.01G025400 2.0kb upstream 2.0kb upstream 3549 true Chr01: 2681720-2685268 Glycine max
Glyma.01G025400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 2681720-2683719 Glycine max
Glyma.01G025400 2.0kb downstream 2.0kb downstream 3549 true Chr01: 2683720-2687268 Glycine max
Glyma.01G025400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 2685269-2687268 Glycine max
Glyma.01G025400 5.0kb upstream 5.0kb upstream 6549 true Chr01: 2678720-2685268 Glycine max
Glyma.01G025400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 2678720-2683719 Glycine max
Glyma.01G025400 5.0kb downstream 5.0kb downstream 6549 true Chr01: 2683720-2690268 Glycine max
Glyma.01G025400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 2685269-2690268 Glycine max
Glyma.01G025400 10.0kb upstream 10.0kb upstream 11549 true Chr01: 2673720-2685268 Glycine max
Glyma.01G025400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 2673720-2683719 Glycine max
Glyma.01G025400 10.0kb downstream 10.0kb downstream 11549 true Chr01: 2683720-2695268 Glycine max
Glyma.01G025400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 2685269-2695268 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310690 5265 Fabidae View MSA
124069333 5270 Rosid View MSA
123742197 5271 Pentapetalae View MSA
122797344 5272 Eudicot View MSA
122048706 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0522074 0.0 0.216094 Low  
cufflinks 7.47965 0.0 21.5463   High
cufflinks 5.19106 0.0 15.7623   High
cufflinks 0.332135 0.0 1.27109    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.43922 0.0 8.15327    
cufflinks 0.074709 0.0 0.303051 Low  
cufflinks 0.137721 0.0 0.545729 Low  
cufflinks 0.0341696 0.0 0.145626 Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.048     Low Low
cufflinks 1.612       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.024     Low Low
cufflinks 0.527        
cufflinks 0.033     Low Low
cufflinks 0.558        
cufflinks 3.785       High
cufflinks 0.438        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.379        
cufflinks 0.741        
cufflinks 0.052     Low Low
cufflinks 0.476        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain