Gene : Glyma.01G034300 G. max Wm82.a2.v1
Defline:  (1 of 16) PTHR32285:SF57 - PROTEIN ALTERED XYLOGLUCAN 4 Genomic Order:  343
Name:  ? Glyma.01G034300 Secondary Identifier:  ? PAC:30543966
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G034300 0.5kb upstream 0.5kb upstream 6813 true Chr01: 3573149-3579961 Glycine max
Glyma.01G034300 0.5kb upstream 0.5kb upstream 500 false Chr01: 3579462-3579961 Glycine max
Glyma.01G034300 0.5kb downstream 0.5kb downstream 6813 true Chr01: 3572649-3579461 Glycine max
Glyma.01G034300 0.5kb downstream 0.5kb downstream 500 false Chr01: 3572649-3573148 Glycine max
Glyma.01G034300 1.0kb upstream 1.0kb upstream 7313 true Chr01: 3573149-3580461 Glycine max
Glyma.01G034300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 3579462-3580461 Glycine max
Glyma.01G034300 1.0kb downstream 1.0kb downstream 7313 true Chr01: 3572149-3579461 Glycine max
Glyma.01G034300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 3572149-3573148 Glycine max
Glyma.01G034300 2.0kb upstream 2.0kb upstream 8313 true Chr01: 3573149-3581461 Glycine max
Glyma.01G034300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 3579462-3581461 Glycine max
Glyma.01G034300 2.0kb downstream 2.0kb downstream 8313 true Chr01: 3571149-3579461 Glycine max
Glyma.01G034300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 3571149-3573148 Glycine max
Glyma.01G034300 5.0kb upstream 5.0kb upstream 11313 true Chr01: 3573149-3584461 Glycine max
Glyma.01G034300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 3579462-3584461 Glycine max
Glyma.01G034300 5.0kb downstream 5.0kb downstream 11313 true Chr01: 3568149-3579461 Glycine max
Glyma.01G034300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 3568149-3573148 Glycine max
Glyma.01G034300 10.0kb upstream 10.0kb upstream 16313 true Chr01: 3573149-3589461 Glycine max
Glyma.01G034300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 3579462-3589461 Glycine max
Glyma.01G034300 10.0kb downstream 10.0kb downstream 16313 true Chr01: 3563149-3579461 Glycine max
Glyma.01G034300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 3563149-3573148 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300392 5265 Fabidae View MSA
124062757 5270 Rosid View MSA
123750797 5271 Pentapetalae View MSA
122786909 5272 Eudicot View MSA
122044387 5273 Angiosperm View MSA
121310287 5274 Embryophyte View MSA
123347814 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.47242 0.0 16.8132    
cufflinks 2.58185 0.0 11.5865   Low
cufflinks 1.53486 0.0 7.90369   Low
cufflinks 3.73285 0.0 14.5308    
cufflinks 9.54298 0.0 34.5687   High
cufflinks 8.66419 0.0 32.3605    
cufflinks 6.52764 0.0 22.6751    
cufflinks 8.88936 0.0 28.3018    
cufflinks 6.99735 0.0 23.5361    
cufflinks 1.106        
cufflinks 1.304        
cufflinks 0.476       Low
cufflinks 2.454       High
cufflinks 2.752       High
cufflinks 0.394       Low
cufflinks 0.765        
cufflinks 0.829        
cufflinks 0.333       Low
cufflinks 0.791        
cufflinks 0.864        
cufflinks 1.702        
cufflinks 0.824        
cufflinks 0.987        
cufflinks 2.102       High
cufflinks 0.809        
cufflinks 1.311        

0 Strain