Gene : Glyma.01G030900 G. max Wm82.a2.v1
Defline:  (1 of 26) PF03181 - BURP domain (BURP) Genomic Order:  309
Name:  ? Glyma.01G030900 Secondary Identifier:  ? PAC:30542713
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G030900 0.5kb upstream 0.5kb upstream 3680 true Chr01: 3233895-3237574 Glycine max
Glyma.01G030900 0.5kb upstream 0.5kb upstream 500 false Chr01: 3233895-3234394 Glycine max
Glyma.01G030900 0.5kb downstream 0.5kb downstream 3680 true Chr01: 3234395-3238074 Glycine max
Glyma.01G030900 0.5kb downstream 0.5kb downstream 500 false Chr01: 3237575-3238074 Glycine max
Glyma.01G030900 1.0kb upstream 1.0kb upstream 4180 true Chr01: 3233395-3237574 Glycine max
Glyma.01G030900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 3233395-3234394 Glycine max
Glyma.01G030900 1.0kb downstream 1.0kb downstream 4180 true Chr01: 3234395-3238574 Glycine max
Glyma.01G030900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 3237575-3238574 Glycine max
Glyma.01G030900 2.0kb upstream 2.0kb upstream 5180 true Chr01: 3232395-3237574 Glycine max
Glyma.01G030900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 3232395-3234394 Glycine max
Glyma.01G030900 2.0kb downstream 2.0kb downstream 5180 true Chr01: 3234395-3239574 Glycine max
Glyma.01G030900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 3237575-3239574 Glycine max
Glyma.01G030900 5.0kb upstream 5.0kb upstream 8180 true Chr01: 3229395-3237574 Glycine max
Glyma.01G030900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 3229395-3234394 Glycine max
Glyma.01G030900 5.0kb downstream 5.0kb downstream 8180 true Chr01: 3234395-3242574 Glycine max
Glyma.01G030900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 3237575-3242574 Glycine max
Glyma.01G030900 10.0kb upstream 10.0kb upstream 13180 true Chr01: 3224395-3237574 Glycine max
Glyma.01G030900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 3224395-3234394 Glycine max
Glyma.01G030900 10.0kb downstream 10.0kb downstream 13180 true Chr01: 3234395-3247574 Glycine max
Glyma.01G030900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 3237575-3247574 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299341 5265 Fabidae View MSA
124060515 5270 Rosid View MSA
123747690 5271 Pentapetalae View MSA
122795038 5272 Eudicot View MSA
122050223 5273 Angiosperm View MSA
121351029 5274 Embryophyte View MSA
123381981 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.10064 0.0 6.55608   Low
cufflinks 12.113 0.0 41.3261    
cufflinks 8.04413 0.0 25.0985    
cufflinks 21.5435 0.0 76.153 High High
cufflinks 9.34029 0.0 32.0152    
cufflinks 3.73299 0.0 12.9207   Low
cufflinks 6.88586 0.0 21.2103    
cufflinks 6.70665 0.0 20.8017    
cufflinks 9.75305 0.0 29.2032    
cufflinks 12.579     High  
cufflinks 0.155       Low
cufflinks 11.767     High  
cufflinks 3.524        
cufflinks 3.219        
cufflinks 2.868        
cufflinks 6.631        
cufflinks 0.768        
cufflinks 53.083     High High
cufflinks 4.828        
cufflinks 7.609     High  
cufflinks 0.333       Low
cufflinks 6.897        
cufflinks 6.296        
cufflinks 0.443       Low
cufflinks 6.785        
cufflinks 0.353       Low

0 Strain