Gene : Glyma.01G018300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR24006:SF470 - PROTEIN Y71A12B.15 Genomic Order:  183
Name:  ? Glyma.01G018300 Secondary Identifier:  ? PAC:30544896
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G018300 0.5kb upstream 0.5kb upstream 4697 true Chr01: 1750027-1754723 Glycine max
Glyma.01G018300 0.5kb upstream 0.5kb upstream 500 false Chr01: 1754224-1754723 Glycine max
Glyma.01G018300 0.5kb downstream 0.5kb downstream 4697 true Chr01: 1749527-1754223 Glycine max
Glyma.01G018300 0.5kb downstream 0.5kb downstream 500 false Chr01: 1749527-1750026 Glycine max
Glyma.01G018300 1.0kb upstream 1.0kb upstream 5197 true Chr01: 1750027-1755223 Glycine max
Glyma.01G018300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 1754224-1755223 Glycine max
Glyma.01G018300 1.0kb downstream 1.0kb downstream 5197 true Chr01: 1749027-1754223 Glycine max
Glyma.01G018300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 1749027-1750026 Glycine max
Glyma.01G018300 2.0kb upstream 2.0kb upstream 6197 true Chr01: 1750027-1756223 Glycine max
Glyma.01G018300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 1754224-1756223 Glycine max
Glyma.01G018300 2.0kb downstream 2.0kb downstream 6197 true Chr01: 1748027-1754223 Glycine max
Glyma.01G018300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 1748027-1750026 Glycine max
Glyma.01G018300 5.0kb upstream 5.0kb upstream 9197 true Chr01: 1750027-1759223 Glycine max
Glyma.01G018300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 1754224-1759223 Glycine max
Glyma.01G018300 5.0kb downstream 5.0kb downstream 9197 true Chr01: 1745027-1754223 Glycine max
Glyma.01G018300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 1745027-1750026 Glycine max
Glyma.01G018300 10.0kb upstream 10.0kb upstream 14197 true Chr01: 1750027-1764223 Glycine max
Glyma.01G018300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 1754224-1764223 Glycine max
Glyma.01G018300 10.0kb downstream 10.0kb downstream 14197 true Chr01: 1740027-1754223 Glycine max
Glyma.01G018300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 1740027-1750026 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306271 5265 Fabidae View MSA
124064624 5270 Rosid View MSA
123747010 5271 Pentapetalae View MSA
122793778 5272 Eudicot View MSA
122046494 5273 Angiosperm View MSA
121350818 5274 Embryophyte View MSA
123428412 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.67738 0.0 8.03252    
cufflinks 4.21565 0.0 11.9319   High
cufflinks 2.91135 0.0 8.61232    
cufflinks 1.94814 0.0 6.10495   Low
cufflinks 3.96228 0.0 11.3018   High
cufflinks 2.53849 0.0 7.65153    
cufflinks 2.11007 0.0 6.56445    
cufflinks 2.11994 0.0 6.56663    
cufflinks 3.39417 0.0 9.85034    
cufflinks 1.761        
cufflinks 1.079       Low
cufflinks 2.28        
cufflinks 4.285       High
cufflinks 4.771       High
cufflinks 1.238        
cufflinks 1.915        
cufflinks 2.625        
cufflinks 1.319        
cufflinks 5.015       High
cufflinks 1.438        
cufflinks 0.976       Low
cufflinks 1.792        
cufflinks 4.974       High
cufflinks 1.612        
cufflinks 1.304        
cufflinks 2.109        

0 Strain