Gene : Glyma.01G017300 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR14155//PTHR14155:SF87 - RING FINGER DOMAIN-CONTAINING Genomic Order:  173
Name:  ? Glyma.01G017300 Secondary Identifier:  ? PAC:30542465
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G017300 0.5kb upstream 0.5kb upstream 2173 true Chr01: 1648449-1650621 Glycine max
Glyma.01G017300 0.5kb upstream 0.5kb upstream 500 false Chr01: 1650122-1650621 Glycine max
Glyma.01G017300 0.5kb downstream 0.5kb downstream 2173 true Chr01: 1647949-1650121 Glycine max
Glyma.01G017300 0.5kb downstream 0.5kb downstream 500 false Chr01: 1647949-1648448 Glycine max
Glyma.01G017300 1.0kb upstream 1.0kb upstream 2673 true Chr01: 1648449-1651121 Glycine max
Glyma.01G017300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 1650122-1651121 Glycine max
Glyma.01G017300 1.0kb downstream 1.0kb downstream 2673 true Chr01: 1647449-1650121 Glycine max
Glyma.01G017300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 1647449-1648448 Glycine max
Glyma.01G017300 2.0kb upstream 2.0kb upstream 3673 true Chr01: 1648449-1652121 Glycine max
Glyma.01G017300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 1650122-1652121 Glycine max
Glyma.01G017300 2.0kb downstream 2.0kb downstream 3673 true Chr01: 1646449-1650121 Glycine max
Glyma.01G017300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 1646449-1648448 Glycine max
Glyma.01G017300 5.0kb upstream 5.0kb upstream 6673 true Chr01: 1648449-1655121 Glycine max
Glyma.01G017300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 1650122-1655121 Glycine max
Glyma.01G017300 5.0kb downstream 5.0kb downstream 6673 true Chr01: 1643449-1650121 Glycine max
Glyma.01G017300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 1643449-1648448 Glycine max
Glyma.01G017300 10.0kb upstream 10.0kb upstream 11673 true Chr01: 1648449-1660121 Glycine max
Glyma.01G017300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 1650122-1660121 Glycine max
Glyma.01G017300 10.0kb downstream 10.0kb downstream 11673 true Chr01: 1638449-1650121 Glycine max
Glyma.01G017300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 1638449-1648448 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307508 5265 Fabidae View MSA
124072575 5270 Rosid View MSA
123753111 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.848612 0.0 5.11385   Low
cufflinks 4.4589 0.0 17.6733    
cufflinks 0.824745 0.0 4.88498   Low
cufflinks 1.34249 0.0 7.41228    
cufflinks 3.41928 0.0 14.9778    
cufflinks 0.980624 0.0 5.69651    
cufflinks 1.72031 0.0 9.18845    
cufflinks 7.36699 0.0 25.0888   High
cufflinks 3.66539 0.0 15.4269    
cufflinks 1.493        
cufflinks 0.173       Low
cufflinks 0.788        
cufflinks 1.154        
cufflinks 1.048        
cufflinks 0.018     Low Low
cufflinks 1.299        
cufflinks 0.261        
cufflinks 1.418        
cufflinks 0.866        
cufflinks 1.093        
cufflinks 0.363        
cufflinks 1.291        
cufflinks 1.023        
cufflinks 0.34        
cufflinks 1.011        
cufflinks 0.468        

0 Strain