Gene : Glyma.01G017800 G. max Wm82.a2.v1
Genomic Order:  178 Name:  ? Glyma.01G017800
Secondary Identifier:  ? PAC:30543945
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G017800 0.5kb upstream 0.5kb upstream 1749 true Chr01: 1721770-1723518 Glycine max
Glyma.01G017800 0.5kb upstream 0.5kb upstream 500 false Chr01: 1721770-1722269 Glycine max
Glyma.01G017800 0.5kb downstream 0.5kb downstream 1749 true Chr01: 1722270-1724018 Glycine max
Glyma.01G017800 0.5kb downstream 0.5kb downstream 500 false Chr01: 1723519-1724018 Glycine max
Glyma.01G017800 1.0kb upstream 1.0kb upstream 2249 true Chr01: 1721270-1723518 Glycine max
Glyma.01G017800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 1721270-1722269 Glycine max
Glyma.01G017800 1.0kb downstream 1.0kb downstream 2249 true Chr01: 1722270-1724518 Glycine max
Glyma.01G017800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 1723519-1724518 Glycine max
Glyma.01G017800 2.0kb upstream 2.0kb upstream 3249 true Chr01: 1720270-1723518 Glycine max
Glyma.01G017800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 1720270-1722269 Glycine max
Glyma.01G017800 2.0kb downstream 2.0kb downstream 3249 true Chr01: 1722270-1725518 Glycine max
Glyma.01G017800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 1723519-1725518 Glycine max
Glyma.01G017800 5.0kb upstream 5.0kb upstream 6249 true Chr01: 1717270-1723518 Glycine max
Glyma.01G017800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 1717270-1722269 Glycine max
Glyma.01G017800 5.0kb downstream 5.0kb downstream 6249 true Chr01: 1722270-1728518 Glycine max
Glyma.01G017800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 1723519-1728518 Glycine max
Glyma.01G017800 10.0kb upstream 10.0kb upstream 11249 true Chr01: 1712270-1723518 Glycine max
Glyma.01G017800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 1712270-1722269 Glycine max
Glyma.01G017800 10.0kb downstream 10.0kb downstream 11249 true Chr01: 1722270-1733518 Glycine max
Glyma.01G017800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 1723519-1733518 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308635 5265 Fabidae View MSA
124061108 5270 Rosid View MSA
123749488 5271 Pentapetalae View MSA
122791117 5272 Eudicot View MSA
122045844 5273 Angiosperm View MSA
121310514 5274 Embryophyte View MSA
123347977 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.34756 0.0 27.6954   High
cufflinks 1.43606 0.0 6.52425    
cufflinks 4.16025 0.0 15.3528    
cufflinks 2.72021 0.0 10.9242    
cufflinks 3.28271 0.0 11.8524    
cufflinks 9.05413 0.0 31.6416   High
cufflinks 0.622674 0.0 3.09245   Low
cufflinks 2.77989 0.0 14.5944    
cufflinks 3.52158 0.0 17.1162    
cufflinks 0.989        
cufflinks 1.866        
cufflinks 2.388        
cufflinks 1.804        
cufflinks 0.867        
cufflinks 0.687       Low
cufflinks 1.263        
cufflinks 7.154     High High
cufflinks 1.53        
cufflinks 0.45       Low
cufflinks 1.167        
cufflinks 1.881        
cufflinks 0.978        
cufflinks 1.212        
cufflinks 2.842       High
cufflinks 1.05        
cufflinks 2.628        

0 Strain