Gene : Glyma.01G042800 G. max Wm82.a2.v1
Defline:  (1 of 4) PF07889 - Protein of unknown function (DUF1664) (DUF1664) Genomic Order:  428
Name:  ? Glyma.01G042800 Secondary Identifier:  ? PAC:30543314
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G042800 0.5kb upstream 0.5kb upstream 6806 true Chr01: 4671215-4678020 Glycine max
Glyma.01G042800 0.5kb upstream 0.5kb upstream 500 false Chr01: 4677521-4678020 Glycine max
Glyma.01G042800 0.5kb downstream 0.5kb downstream 6806 true Chr01: 4670715-4677520 Glycine max
Glyma.01G042800 0.5kb downstream 0.5kb downstream 500 false Chr01: 4670715-4671214 Glycine max
Glyma.01G042800 1.0kb upstream 1.0kb upstream 7306 true Chr01: 4671215-4678520 Glycine max
Glyma.01G042800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 4677521-4678520 Glycine max
Glyma.01G042800 1.0kb downstream 1.0kb downstream 7306 true Chr01: 4670215-4677520 Glycine max
Glyma.01G042800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 4670215-4671214 Glycine max
Glyma.01G042800 2.0kb upstream 2.0kb upstream 8306 true Chr01: 4671215-4679520 Glycine max
Glyma.01G042800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 4677521-4679520 Glycine max
Glyma.01G042800 2.0kb downstream 2.0kb downstream 8306 true Chr01: 4669215-4677520 Glycine max
Glyma.01G042800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 4669215-4671214 Glycine max
Glyma.01G042800 5.0kb upstream 5.0kb upstream 11306 true Chr01: 4671215-4682520 Glycine max
Glyma.01G042800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 4677521-4682520 Glycine max
Glyma.01G042800 5.0kb downstream 5.0kb downstream 11306 true Chr01: 4666215-4677520 Glycine max
Glyma.01G042800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 4666215-4671214 Glycine max
Glyma.01G042800 10.0kb upstream 10.0kb upstream 16306 true Chr01: 4671215-4687520 Glycine max
Glyma.01G042800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 4677521-4687520 Glycine max
Glyma.01G042800 10.0kb downstream 10.0kb downstream 16306 true Chr01: 4661215-4677520 Glycine max
Glyma.01G042800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 4661215-4671214 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305529 5265 Fabidae View MSA
124066515 5270 Rosid View MSA
123745740 5271 Pentapetalae View MSA
122789386 5272 Eudicot View MSA
122050291 5273 Angiosperm View MSA
121350785 5274 Embryophyte View MSA
123428058 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 38.9962 0.0 159.675 High  
cufflinks 17.9024 0.0 69.8087   Low
cufflinks 43.7584 0.0 184.68 High High
cufflinks 25.4675 0.0 100.148 High  
cufflinks 21.7741 0.0 93.7285 High  
cufflinks 42.3872 0.0 176.942 High High
cufflinks 15.769 0.0 63.4009   Low
cufflinks 34.0186 0.0 137.092 High  
cufflinks 23.721 0.0 92.8657 High  
cufflinks 1.45       Low
cufflinks 3.394       High
cufflinks 2.515        
cufflinks 1.85        
cufflinks 1.523       Low
cufflinks 2.51        
cufflinks 1.761        
cufflinks 1.933        
cufflinks 1.801        
cufflinks 1.661        
cufflinks 1.894        
cufflinks 3.175       High
cufflinks 1.979        
cufflinks 1.476       Low
cufflinks 3.809       High
cufflinks 1.758        
cufflinks 3.023       High

0 Strain