Gene : Glyma.18G228400 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR10783:SF46 - EXS (ERD1/XPR1/SYG1) DOMAIN PROTEIN-RELATED Genomic Order:  2284
Name:  ? Glyma.18G228400 Secondary Identifier:  ? PAC:30555586
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G228400 0.5kb upstream 0.5kb upstream 8079 true Chr18: 51747748-51755826 Glycine max
Glyma.18G228400 0.5kb upstream 0.5kb upstream 500 false Chr18: 51747748-51748247 Glycine max
Glyma.18G228400 0.5kb downstream 0.5kb downstream 8079 true Chr18: 51748248-51756326 Glycine max
Glyma.18G228400 0.5kb downstream 0.5kb downstream 500 false Chr18: 51755827-51756326 Glycine max
Glyma.18G228400 1.0kb upstream 1.0kb upstream 8579 true Chr18: 51747248-51755826 Glycine max
Glyma.18G228400 1.0kb upstream 1.0kb upstream 1000 false Chr18: 51747248-51748247 Glycine max
Glyma.18G228400 1.0kb downstream 1.0kb downstream 8579 true Chr18: 51748248-51756826 Glycine max
Glyma.18G228400 1.0kb downstream 1.0kb downstream 1000 false Chr18: 51755827-51756826 Glycine max
Glyma.18G228400 2.0kb upstream 2.0kb upstream 9579 true Chr18: 51746248-51755826 Glycine max
Glyma.18G228400 2.0kb upstream 2.0kb upstream 2000 false Chr18: 51746248-51748247 Glycine max
Glyma.18G228400 2.0kb downstream 2.0kb downstream 9579 true Chr18: 51748248-51757826 Glycine max
Glyma.18G228400 2.0kb downstream 2.0kb downstream 2000 false Chr18: 51755827-51757826 Glycine max
Glyma.18G228400 5.0kb upstream 5.0kb upstream 12579 true Chr18: 51743248-51755826 Glycine max
Glyma.18G228400 5.0kb upstream 5.0kb upstream 5000 false Chr18: 51743248-51748247 Glycine max
Glyma.18G228400 5.0kb downstream 5.0kb downstream 12579 true Chr18: 51748248-51760826 Glycine max
Glyma.18G228400 5.0kb downstream 5.0kb downstream 5000 false Chr18: 51755827-51760826 Glycine max
Glyma.18G228400 10.0kb upstream 10.0kb upstream 17579 true Chr18: 51738248-51755826 Glycine max
Glyma.18G228400 10.0kb upstream 10.0kb upstream 10000 false Chr18: 51738248-51748247 Glycine max
Glyma.18G228400 10.0kb downstream 10.0kb downstream 17579 true Chr18: 51748248-51765826 Glycine max
Glyma.18G228400 10.0kb downstream 10.0kb downstream 10000 false Chr18: 51755827-51765826 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306306 5265 Fabidae View MSA
124063910 5270 Rosid View MSA
123749394 5271 Pentapetalae View MSA
122792287 5272 Eudicot View MSA
122045610 5273 Angiosperm View MSA
121348290 5274 Embryophyte View MSA
123424613 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.37761 0.0 16.6871    
cufflinks 3.01038 0.0 12.2688   Low
cufflinks 3.9933 0.0 15.3186    
cufflinks 5.69593 0.0 19.5901    
cufflinks 6.97972 0.0 22.5379   High
cufflinks 5.99779 0.0 20.6815    
cufflinks 3.06241 0.0 12.6559   Low
cufflinks 8.15804 0.0 27.0314   High
cufflinks 3.84007 0.0 15.1529    
cufflinks 0.812       High
cufflinks 0.199       Low
cufflinks 0.487        
cufflinks 0.762        
cufflinks 1.128       High
cufflinks 0.098       Low
cufflinks 0.554        
cufflinks 0.208       Low
cufflinks 0.575        
cufflinks 0.398        
cufflinks 0.456        
cufflinks 0.188       Low
cufflinks 0.561        
cufflinks 0.598        
cufflinks 0.382        
cufflinks 0.511        
cufflinks 0.25        

0 Strain