Gene : Glyma.01G038500 G. max Wm82.a2.v1
Defline:  (1 of 9) PF13704 - Glycosyl transferase family 2 (Glyco_tranf_2_4) Genomic Order:  385
Name:  ? Glyma.01G038500 Secondary Identifier:  ? PAC:30544757
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G038500 0.5kb upstream 0.5kb upstream 2952 true Chr01: 4115490-4118441 Glycine max
Glyma.01G038500 0.5kb upstream 0.5kb upstream 500 false Chr01: 4115490-4115989 Glycine max
Glyma.01G038500 0.5kb downstream 0.5kb downstream 2952 true Chr01: 4115990-4118941 Glycine max
Glyma.01G038500 0.5kb downstream 0.5kb downstream 500 false Chr01: 4118442-4118941 Glycine max
Glyma.01G038500 1.0kb upstream 1.0kb upstream 3452 true Chr01: 4114990-4118441 Glycine max
Glyma.01G038500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 4114990-4115989 Glycine max
Glyma.01G038500 1.0kb downstream 1.0kb downstream 3452 true Chr01: 4115990-4119441 Glycine max
Glyma.01G038500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 4118442-4119441 Glycine max
Glyma.01G038500 2.0kb upstream 2.0kb upstream 4452 true Chr01: 4113990-4118441 Glycine max
Glyma.01G038500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 4113990-4115989 Glycine max
Glyma.01G038500 2.0kb downstream 2.0kb downstream 4452 true Chr01: 4115990-4120441 Glycine max
Glyma.01G038500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 4118442-4120441 Glycine max
Glyma.01G038500 5.0kb upstream 5.0kb upstream 7452 true Chr01: 4110990-4118441 Glycine max
Glyma.01G038500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 4110990-4115989 Glycine max
Glyma.01G038500 5.0kb downstream 5.0kb downstream 7452 true Chr01: 4115990-4123441 Glycine max
Glyma.01G038500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 4118442-4123441 Glycine max
Glyma.01G038500 10.0kb upstream 10.0kb upstream 12452 true Chr01: 4105990-4118441 Glycine max
Glyma.01G038500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 4105990-4115989 Glycine max
Glyma.01G038500 10.0kb downstream 10.0kb downstream 12452 true Chr01: 4115990-4128441 Glycine max
Glyma.01G038500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 4118442-4128441 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300133 5265 Fabidae View MSA
124068456 5270 Rosid View MSA
123741891 5271 Pentapetalae View MSA
122797003 5272 Eudicot View MSA
122047525 5273 Angiosperm View MSA
123428981 5275 Viridiplantae View MSA
121349408 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.98595 0.0 13.9388    
cufflinks 2.68848 0.0 8.14356    
cufflinks 3.82838 0.0 11.0535    
cufflinks 2.01261 0.0 6.33312   Low
cufflinks 5.12176 0.0 14.2556    
cufflinks 9.42928 0.0 25.2852   High
cufflinks 1.71018 0.0 5.49173   Low
cufflinks 4.28716 0.0 12.1874    
cufflinks 5.76253 0.0 15.8992    
cufflinks 10.078     High  
cufflinks 18.4     High High
cufflinks 5.568        
cufflinks 6.581        
cufflinks 3.162       Low
cufflinks 31.46     High High
cufflinks 6.17        
cufflinks 26.746     High High
cufflinks 4.45        
cufflinks 3.85        
cufflinks 3.408       Low
cufflinks 12.429     High  
cufflinks 4.436        
cufflinks 4.671        
cufflinks 12.193     High  
cufflinks 3.347       Low
cufflinks 15.65     High  

0 Strain