Gene : Glyma.01G053600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31558:SF1 - F7A19.6 PROTEIN-RELATED Genomic Order:  536
Name:  ? Glyma.01G053600 Secondary Identifier:  ? PAC:30543351
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G053600 0.5kb upstream 0.5kb upstream 6800 true Chr01: 6786541-6793340 Glycine max
Glyma.01G053600 0.5kb upstream 0.5kb upstream 500 false Chr01: 6786541-6787040 Glycine max
Glyma.01G053600 0.5kb downstream 0.5kb downstream 6800 true Chr01: 6787041-6793840 Glycine max
Glyma.01G053600 0.5kb downstream 0.5kb downstream 500 false Chr01: 6793341-6793840 Glycine max
Glyma.01G053600 1.0kb upstream 1.0kb upstream 7300 true Chr01: 6786041-6793340 Glycine max
Glyma.01G053600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 6786041-6787040 Glycine max
Glyma.01G053600 1.0kb downstream 1.0kb downstream 7300 true Chr01: 6787041-6794340 Glycine max
Glyma.01G053600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 6793341-6794340 Glycine max
Glyma.01G053600 2.0kb upstream 2.0kb upstream 8300 true Chr01: 6785041-6793340 Glycine max
Glyma.01G053600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 6785041-6787040 Glycine max
Glyma.01G053600 2.0kb downstream 2.0kb downstream 8300 true Chr01: 6787041-6795340 Glycine max
Glyma.01G053600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 6793341-6795340 Glycine max
Glyma.01G053600 5.0kb upstream 5.0kb upstream 11300 true Chr01: 6782041-6793340 Glycine max
Glyma.01G053600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 6782041-6787040 Glycine max
Glyma.01G053600 5.0kb downstream 5.0kb downstream 11300 true Chr01: 6787041-6798340 Glycine max
Glyma.01G053600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 6793341-6798340 Glycine max
Glyma.01G053600 10.0kb upstream 10.0kb upstream 16300 true Chr01: 6777041-6793340 Glycine max
Glyma.01G053600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 6777041-6787040 Glycine max
Glyma.01G053600 10.0kb downstream 10.0kb downstream 16300 true Chr01: 6787041-6803340 Glycine max
Glyma.01G053600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 6793341-6803340 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302118 5265 Fabidae View MSA
124073265 5270 Rosid View MSA
123751293 5271 Pentapetalae View MSA
122789069 5272 Eudicot View MSA
122042640 5273 Angiosperm View MSA
121348788 5274 Embryophyte View MSA
123427527 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0106681 0.0 0.0546692 Low Low
cufflinks 0.0713169 0.0 0.284946 Low  
cufflinks 3.09688 0.0 11.7993   High
cufflinks 0.094538 0.0 0.720511 Low  
cufflinks 0.118378 0.0 0.463662 Low  
cufflinks 0.313738 0.0 1.56675    
cufflinks 0.094967 0.0 0.376122 Low  
cufflinks 0.178635 0.0 1.21283 Low  
cufflinks 0.195797 0.0 1.33659 Low  
cufflinks 0.037     Low  
cufflinks 0.02     Low Low
cufflinks 0.231       High
cufflinks 0.082     Low  
cufflinks 0.036     Low  
cufflinks 0.055        
cufflinks 0.04     Low  
cufflinks 0.053     Low  
cufflinks 0.362       High
cufflinks 0.047     Low  
cufflinks 0.035     Low  
cufflinks 0.048     Low  
cufflinks 0.022     Low  
cufflinks 0.024     Low  
cufflinks 0.027     Low  
cufflinks 0.032     Low  
cufflinks 0.023     Low  

0 Strain