Gene : Glyma.01G060900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR33403:SF5 - PROTEIN SPIRAL1-LIKE 2-RELATED Genomic Order:  609
Name:  ? Glyma.01G060900 Secondary Identifier:  ? PAC:30544693
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G060900 0.5kb upstream 0.5kb upstream 3156 true Chr01: 8392862-8396017 Glycine max
Glyma.01G060900 0.5kb upstream 0.5kb upstream 500 false Chr01: 8392862-8393361 Glycine max
Glyma.01G060900 0.5kb downstream 0.5kb downstream 3156 true Chr01: 8393362-8396517 Glycine max
Glyma.01G060900 0.5kb downstream 0.5kb downstream 500 false Chr01: 8396018-8396517 Glycine max
Glyma.01G060900 1.0kb upstream 1.0kb upstream 3656 true Chr01: 8392362-8396017 Glycine max
Glyma.01G060900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 8392362-8393361 Glycine max
Glyma.01G060900 1.0kb downstream 1.0kb downstream 3656 true Chr01: 8393362-8397017 Glycine max
Glyma.01G060900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 8396018-8397017 Glycine max
Glyma.01G060900 2.0kb upstream 2.0kb upstream 4656 true Chr01: 8391362-8396017 Glycine max
Glyma.01G060900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 8391362-8393361 Glycine max
Glyma.01G060900 2.0kb downstream 2.0kb downstream 4656 true Chr01: 8393362-8398017 Glycine max
Glyma.01G060900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 8396018-8398017 Glycine max
Glyma.01G060900 5.0kb upstream 5.0kb upstream 7656 true Chr01: 8388362-8396017 Glycine max
Glyma.01G060900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 8388362-8393361 Glycine max
Glyma.01G060900 5.0kb downstream 5.0kb downstream 7656 true Chr01: 8393362-8401017 Glycine max
Glyma.01G060900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 8396018-8401017 Glycine max
Glyma.01G060900 10.0kb upstream 10.0kb upstream 12656 true Chr01: 8383362-8396017 Glycine max
Glyma.01G060900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 8383362-8393361 Glycine max
Glyma.01G060900 10.0kb downstream 10.0kb downstream 12656 true Chr01: 8393362-8406017 Glycine max
Glyma.01G060900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 8396018-8406017 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314267 5265 Fabidae View MSA
124060662 5270 Rosid View MSA
123749851 5271 Pentapetalae View MSA
122787340 5272 Eudicot View MSA
122045105 5273 Angiosperm View MSA
121351504 5274 Embryophyte View MSA
123425662 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 44.324 0.0 170.752 High Low
cufflinks 105.433 0.0 436.389 High  
cufflinks 64.983 0.0 255.098 High Low
cufflinks 146.006 0.0 663.425 High  
cufflinks 115.678 0.0 489.675 High  
cufflinks 123.787 0.0 535.182 High  
cufflinks 166.842 0.0 724.762 High High
cufflinks 148.632 0.0 681.484 High  
cufflinks 91.3542 0.0 369.63 High  
cufflinks 7.479       High
cufflinks 1.922       Low
cufflinks 3.272        
cufflinks 4.506        
cufflinks 5.294       High
cufflinks 2.392        
cufflinks 3.29        
cufflinks 2.053        
cufflinks 5.675       High
cufflinks 5.949       High
cufflinks 2.838        
cufflinks 2.217        
cufflinks 2.955        
cufflinks 2.857        
cufflinks 1.71       Low
cufflinks 2.994        
cufflinks 2.099        

0 Strain