Gene : Glyma.01G146400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31413:SF2 - AFP HOMOLOG 2 Genomic Order:  1464
Name:  ? Glyma.01G146400 Secondary Identifier:  ? PAC:30541752
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G146400 0.5kb upstream 0.5kb upstream 3939 true Chr01: 48169348-48173286 Glycine max
Glyma.01G146400 0.5kb upstream 0.5kb upstream 500 false Chr01: 48169348-48169847 Glycine max
Glyma.01G146400 0.5kb downstream 0.5kb downstream 3939 true Chr01: 48169848-48173786 Glycine max
Glyma.01G146400 0.5kb downstream 0.5kb downstream 500 false Chr01: 48173287-48173786 Glycine max
Glyma.01G146400 1.0kb upstream 1.0kb upstream 4439 true Chr01: 48168848-48173286 Glycine max
Glyma.01G146400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 48168848-48169847 Glycine max
Glyma.01G146400 1.0kb downstream 1.0kb downstream 4439 true Chr01: 48169848-48174286 Glycine max
Glyma.01G146400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 48173287-48174286 Glycine max
Glyma.01G146400 2.0kb upstream 2.0kb upstream 5439 true Chr01: 48167848-48173286 Glycine max
Glyma.01G146400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 48167848-48169847 Glycine max
Glyma.01G146400 2.0kb downstream 2.0kb downstream 5439 true Chr01: 48169848-48175286 Glycine max
Glyma.01G146400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 48173287-48175286 Glycine max
Glyma.01G146400 5.0kb upstream 5.0kb upstream 8439 true Chr01: 48164848-48173286 Glycine max
Glyma.01G146400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 48164848-48169847 Glycine max
Glyma.01G146400 5.0kb downstream 5.0kb downstream 8439 true Chr01: 48169848-48178286 Glycine max
Glyma.01G146400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 48173287-48178286 Glycine max
Glyma.01G146400 10.0kb upstream 10.0kb upstream 13439 true Chr01: 48159848-48173286 Glycine max
Glyma.01G146400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 48159848-48169847 Glycine max
Glyma.01G146400 10.0kb downstream 10.0kb downstream 13439 true Chr01: 48169848-48183286 Glycine max
Glyma.01G146400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 48173287-48183286 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302818 5265 Fabidae View MSA
124067449 5270 Rosid View MSA
123751299 5271 Pentapetalae View MSA
122788952 5272 Eudicot View MSA
122043015 5273 Angiosperm View MSA
121310063 5274 Embryophyte View MSA
123347659 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.0449 0.0 32.1352   Low
cufflinks 18.8262 0.0 50.6977    
cufflinks 27.3618 0.0 75.7375 High High
cufflinks 14.0915 0.0 37.6376    
cufflinks 17.1669 0.0 46.0572    
cufflinks 25.012 0.0 68.554 High High
cufflinks 18.2575 0.0 49.0681    
cufflinks 17.9552 0.0 48.2832    
cufflinks 17.0441 0.0 45.7291    
cufflinks 11.791     High  
cufflinks 9.225     High  
cufflinks 21.674     High High
cufflinks 17.857     High  
cufflinks 17.757     High  
cufflinks 7.484     High Low
cufflinks 17.905     High  
cufflinks 5.956       Low
cufflinks 16.163     High  
cufflinks 19.238     High  
cufflinks 18.918     High  
cufflinks 10.091     High  
cufflinks 19.303     High  
cufflinks 14.804     High  
cufflinks 10.872     High  
cufflinks 17.952     High  
cufflinks 7.535     High Low

0 Strain