Gene : Glyma.01G154100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22990 - F-BOX ONLY PROTEIN Genomic Order:  1541
Name:  ? Glyma.01G154100 Secondary Identifier:  ? PAC:30542748
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G154100 0.5kb upstream 0.5kb upstream 3683 true Chr01: 49136906-49140588 Glycine max
Glyma.01G154100 0.5kb upstream 0.5kb upstream 500 false Chr01: 49140089-49140588 Glycine max
Glyma.01G154100 0.5kb downstream 0.5kb downstream 3683 true Chr01: 49136406-49140088 Glycine max
Glyma.01G154100 0.5kb downstream 0.5kb downstream 500 false Chr01: 49136406-49136905 Glycine max
Glyma.01G154100 1.0kb upstream 1.0kb upstream 4183 true Chr01: 49136906-49141088 Glycine max
Glyma.01G154100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 49140089-49141088 Glycine max
Glyma.01G154100 1.0kb downstream 1.0kb downstream 4183 true Chr01: 49135906-49140088 Glycine max
Glyma.01G154100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 49135906-49136905 Glycine max
Glyma.01G154100 2.0kb upstream 2.0kb upstream 5183 true Chr01: 49136906-49142088 Glycine max
Glyma.01G154100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 49140089-49142088 Glycine max
Glyma.01G154100 2.0kb downstream 2.0kb downstream 5183 true Chr01: 49134906-49140088 Glycine max
Glyma.01G154100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 49134906-49136905 Glycine max
Glyma.01G154100 5.0kb upstream 5.0kb upstream 8183 true Chr01: 49136906-49145088 Glycine max
Glyma.01G154100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 49140089-49145088 Glycine max
Glyma.01G154100 5.0kb downstream 5.0kb downstream 8183 true Chr01: 49131906-49140088 Glycine max
Glyma.01G154100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 49131906-49136905 Glycine max
Glyma.01G154100 10.0kb upstream 10.0kb upstream 13183 true Chr01: 49136906-49150088 Glycine max
Glyma.01G154100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 49140089-49150088 Glycine max
Glyma.01G154100 10.0kb downstream 10.0kb downstream 13183 true Chr01: 49126906-49140088 Glycine max
Glyma.01G154100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 49126906-49136905 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041271 5273 Angiosperm View MSA
122307369 5265 Fabidae View MSA
124064461 5270 Rosid View MSA
123751585 5271 Pentapetalae View MSA
122789418 5272 Eudicot View MSA
121344604 5274 Embryophyte View MSA
123428680 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.2935 0.0 35.8215    
cufflinks 10.8376 0.0 29.5262    
cufflinks 16.1713 0.0 43.2603   High
cufflinks 10.0857 0.0 27.6128    
cufflinks 8.40815 0.0 23.3657    
cufflinks 8.19205 0.0 22.8097    
cufflinks 9.78703 0.0 26.8864    
cufflinks 12.2146 0.0 33.0211    
cufflinks 7.21821 0.0 20.3509   Low
cufflinks 4.971       Low
cufflinks 8.571     High High
cufflinks 5.252        
cufflinks 4.934       Low
cufflinks 4.616       Low
cufflinks 6.325     High  
cufflinks 8.013     High  
cufflinks 4.214       Low
cufflinks 6.725        
cufflinks 6.728        
cufflinks 8.767     High High
cufflinks 6.689     High  
cufflinks 8.179     High High
cufflinks 5.942        
cufflinks 7.725     High  
cufflinks 7.724     High  
cufflinks 5.954        

0 Strain