Gene : Glyma.01G158400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10073:SF7 - DNA MISMATCH REPAIR PROTEIN MLH3-RELATED Genomic Order:  1584
Name:  ? Glyma.01G158400 Secondary Identifier:  ? PAC:30543823
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G158400 0.5kb upstream 0.5kb upstream 11263 true Chr01: 49635356-49646618 Glycine max
Glyma.01G158400 0.5kb upstream 0.5kb upstream 500 false Chr01: 49635356-49635855 Glycine max
Glyma.01G158400 0.5kb downstream 0.5kb downstream 11263 true Chr01: 49635856-49647118 Glycine max
Glyma.01G158400 0.5kb downstream 0.5kb downstream 500 false Chr01: 49646619-49647118 Glycine max
Glyma.01G158400 1.0kb upstream 1.0kb upstream 11763 true Chr01: 49634856-49646618 Glycine max
Glyma.01G158400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 49634856-49635855 Glycine max
Glyma.01G158400 1.0kb downstream 1.0kb downstream 11763 true Chr01: 49635856-49647618 Glycine max
Glyma.01G158400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 49646619-49647618 Glycine max
Glyma.01G158400 2.0kb upstream 2.0kb upstream 12763 true Chr01: 49633856-49646618 Glycine max
Glyma.01G158400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 49633856-49635855 Glycine max
Glyma.01G158400 2.0kb downstream 2.0kb downstream 12763 true Chr01: 49635856-49648618 Glycine max
Glyma.01G158400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 49646619-49648618 Glycine max
Glyma.01G158400 5.0kb upstream 5.0kb upstream 15763 true Chr01: 49630856-49646618 Glycine max
Glyma.01G158400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 49630856-49635855 Glycine max
Glyma.01G158400 5.0kb downstream 5.0kb downstream 15763 true Chr01: 49635856-49651618 Glycine max
Glyma.01G158400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 49646619-49651618 Glycine max
Glyma.01G158400 10.0kb upstream 10.0kb upstream 20763 true Chr01: 49625856-49646618 Glycine max
Glyma.01G158400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 49625856-49635855 Glycine max
Glyma.01G158400 10.0kb downstream 10.0kb downstream 20763 true Chr01: 49635856-49656618 Glycine max
Glyma.01G158400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 49646619-49656618 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026337 5273 Angiosperm View MSA
122310562 5265 Fabidae View MSA
124064440 5270 Rosid View MSA
123740384 5271 Pentapetalae View MSA
122793914 5272 Eudicot View MSA
121346649 5274 Embryophyte View MSA
123426273 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.6946 0.0 11.5926    
cufflinks 2.89297 0.0 9.4668    
cufflinks 6.95394 0.0 23.8391   High
cufflinks 2.35938 0.0 9.4031    
cufflinks 1.72614 0.0 6.49345    
cufflinks 1.11744 0.0 3.6706   Low
cufflinks 7.53491 0.0 26.0802   High
cufflinks 2.12086 0.0 8.73454    
cufflinks 2.88002 0.0 9.48696    
cufflinks 0.481        
cufflinks 0.437        
cufflinks 1.419       High
cufflinks 0.513        
cufflinks 0.451        
cufflinks 2.081       High
cufflinks 0.53        
cufflinks 0.542        
cufflinks 1.163       High
cufflinks 0.822        
cufflinks 0.656        
cufflinks 0.367       Low
cufflinks 0.621        
cufflinks 0.71        
cufflinks 0.442        
cufflinks 0.56        
cufflinks 0.379       Low

0 Strain