Gene : Glyma.01G157800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13954 - IRE1-RELATED Genomic Order:  1578
Name:  ? Glyma.01G157800 Secondary Identifier:  ? PAC:30544191
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G157800 0.5kb upstream 0.5kb upstream 7515 true Chr01: 49582932-49590446 Glycine max
Glyma.01G157800 0.5kb upstream 0.5kb upstream 500 false Chr01: 49582932-49583431 Glycine max
Glyma.01G157800 0.5kb downstream 0.5kb downstream 7515 true Chr01: 49583432-49590946 Glycine max
Glyma.01G157800 0.5kb downstream 0.5kb downstream 500 false Chr01: 49590447-49590946 Glycine max
Glyma.01G157800 1.0kb upstream 1.0kb upstream 8015 true Chr01: 49582432-49590446 Glycine max
Glyma.01G157800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 49582432-49583431 Glycine max
Glyma.01G157800 1.0kb downstream 1.0kb downstream 8015 true Chr01: 49583432-49591446 Glycine max
Glyma.01G157800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 49590447-49591446 Glycine max
Glyma.01G157800 2.0kb upstream 2.0kb upstream 9015 true Chr01: 49581432-49590446 Glycine max
Glyma.01G157800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 49581432-49583431 Glycine max
Glyma.01G157800 2.0kb downstream 2.0kb downstream 9015 true Chr01: 49583432-49592446 Glycine max
Glyma.01G157800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 49590447-49592446 Glycine max
Glyma.01G157800 5.0kb upstream 5.0kb upstream 12015 true Chr01: 49578432-49590446 Glycine max
Glyma.01G157800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 49578432-49583431 Glycine max
Glyma.01G157800 5.0kb downstream 5.0kb downstream 12015 true Chr01: 49583432-49595446 Glycine max
Glyma.01G157800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 49590447-49595446 Glycine max
Glyma.01G157800 10.0kb upstream 10.0kb upstream 17015 true Chr01: 49573432-49590446 Glycine max
Glyma.01G157800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 49573432-49583431 Glycine max
Glyma.01G157800 10.0kb downstream 10.0kb downstream 17015 true Chr01: 49583432-49600446 Glycine max
Glyma.01G157800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 49590447-49600446 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313681 5265 Fabidae View MSA
124069221 5270 Rosid View MSA
123736649 5271 Pentapetalae View MSA
122796979 5272 Eudicot View MSA
122047028 5273 Angiosperm View MSA
123429186 5275 Viridiplantae View MSA
121347978 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.76221 0.0 20.7882    
cufflinks 4.461 0.0 12.309    
cufflinks 13.7871 0.0 36.9971   High
cufflinks 4.71585 0.0 12.9473    
cufflinks 4.03915 0.0 11.2626    
cufflinks 7.43895 0.0 19.9431    
cufflinks 4.51843 0.0 12.4935    
cufflinks 5.48006 0.0 14.9011    
cufflinks 4.65558 0.0 12.8079    
cufflinks 2.07       Low
cufflinks 4.42        
cufflinks 5.361       High
cufflinks 3.181        
cufflinks 2.603        
cufflinks 4.299        
cufflinks 3.719        
cufflinks 1.262       Low
cufflinks 3.129        
cufflinks 2.856        
cufflinks 4.174        
cufflinks 4.507        
cufflinks 4.062        
cufflinks 3.192        
cufflinks 5.234       High
cufflinks 3.742        
cufflinks 3.202        

0 Strain