Gene : Glyma.01G162100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR18896:SF60 - PHOSPHOLIPASE D DELTA Genomic Order:  1621
Name:  ? Glyma.01G162100 Secondary Identifier:  ? PAC:30545153
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax LIPASYN-PWY Glycine max pathologic  
Gmax PWY-3561 Glycine max pathologic  
Gmax PWY-7039 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G162100 0.5kb upstream 0.5kb upstream 8851 true Chr01: 50010865-50019715 Glycine max
Glyma.01G162100 0.5kb upstream 0.5kb upstream 500 false Chr01: 50019216-50019715 Glycine max
Glyma.01G162100 0.5kb downstream 0.5kb downstream 8851 true Chr01: 50010365-50019215 Glycine max
Glyma.01G162100 0.5kb downstream 0.5kb downstream 500 false Chr01: 50010365-50010864 Glycine max
Glyma.01G162100 1.0kb upstream 1.0kb upstream 9351 true Chr01: 50010865-50020215 Glycine max
Glyma.01G162100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 50019216-50020215 Glycine max
Glyma.01G162100 1.0kb downstream 1.0kb downstream 9351 true Chr01: 50009865-50019215 Glycine max
Glyma.01G162100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 50009865-50010864 Glycine max
Glyma.01G162100 2.0kb upstream 2.0kb upstream 10351 true Chr01: 50010865-50021215 Glycine max
Glyma.01G162100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 50019216-50021215 Glycine max
Glyma.01G162100 2.0kb downstream 2.0kb downstream 10351 true Chr01: 50008865-50019215 Glycine max
Glyma.01G162100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 50008865-50010864 Glycine max
Glyma.01G162100 5.0kb upstream 5.0kb upstream 13351 true Chr01: 50010865-50024215 Glycine max
Glyma.01G162100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 50019216-50024215 Glycine max
Glyma.01G162100 5.0kb downstream 5.0kb downstream 13351 true Chr01: 50005865-50019215 Glycine max
Glyma.01G162100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 50005865-50010864 Glycine max
Glyma.01G162100 10.0kb upstream 10.0kb upstream 18351 true Chr01: 50010865-50029215 Glycine max
Glyma.01G162100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 50019216-50029215 Glycine max
Glyma.01G162100 10.0kb downstream 10.0kb downstream 18351 true Chr01: 50000865-50019215 Glycine max
Glyma.01G162100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 50000865-50010864 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299229 5265 Fabidae View MSA
124069649 5270 Rosid View MSA
123749606 5271 Pentapetalae View MSA
122795845 5272 Eudicot View MSA
122049262 5273 Angiosperm View MSA
121347041 5274 Embryophyte View MSA
123380485 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.06831 0.0 15.447   Low
cufflinks 6.93705 0.0 24.2484    
cufflinks 9.7371 0.0 33.4928    
cufflinks 29.2135 0.0 115.549 High High
cufflinks 7.93454 0.0 27.6672    
cufflinks 8.81905 0.0 30.5813    
cufflinks 9.83005 0.0 33.82    
cufflinks 13.012 0.0 45.0168    
cufflinks 11.2693 0.0 38.8998    
cufflinks 2.574        
cufflinks 2.241        
cufflinks 1.895        
cufflinks 1.545        
cufflinks 1.978        
cufflinks 2.434        
cufflinks 2.276        
cufflinks 1.239       Low
cufflinks 2.519        
cufflinks 2.164        
cufflinks 2.909       High
cufflinks 1.361       Low
cufflinks 2.212        
cufflinks 1.893        
cufflinks 1.334       Low
cufflinks 2.878       High
cufflinks 1.504       Low

0 Strain