Gene : Glyma.01G161400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR34573:SF1 - THIOL-DISULFIDE OXIDOREDUCTASE LTO1 Genomic Order:  1614
Name:  ? Glyma.01G161400 Secondary Identifier:  ? PAC:30541935
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G161400 0.5kb upstream 0.5kb upstream 2989 true Chr01: 49951202-49954190 Glycine max
Glyma.01G161400 0.5kb upstream 0.5kb upstream 500 false Chr01: 49953691-49954190 Glycine max
Glyma.01G161400 0.5kb downstream 0.5kb downstream 2989 true Chr01: 49950702-49953690 Glycine max
Glyma.01G161400 0.5kb downstream 0.5kb downstream 500 false Chr01: 49950702-49951201 Glycine max
Glyma.01G161400 1.0kb upstream 1.0kb upstream 3489 true Chr01: 49951202-49954690 Glycine max
Glyma.01G161400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 49953691-49954690 Glycine max
Glyma.01G161400 1.0kb downstream 1.0kb downstream 3489 true Chr01: 49950202-49953690 Glycine max
Glyma.01G161400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 49950202-49951201 Glycine max
Glyma.01G161400 2.0kb upstream 2.0kb upstream 4489 true Chr01: 49951202-49955690 Glycine max
Glyma.01G161400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 49953691-49955690 Glycine max
Glyma.01G161400 2.0kb downstream 2.0kb downstream 4489 true Chr01: 49949202-49953690 Glycine max
Glyma.01G161400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 49949202-49951201 Glycine max
Glyma.01G161400 5.0kb upstream 5.0kb upstream 7489 true Chr01: 49951202-49958690 Glycine max
Glyma.01G161400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 49953691-49958690 Glycine max
Glyma.01G161400 5.0kb downstream 5.0kb downstream 7489 true Chr01: 49946202-49953690 Glycine max
Glyma.01G161400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 49946202-49951201 Glycine max
Glyma.01G161400 10.0kb upstream 10.0kb upstream 12489 true Chr01: 49951202-49963690 Glycine max
Glyma.01G161400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 49953691-49963690 Glycine max
Glyma.01G161400 10.0kb downstream 10.0kb downstream 12489 true Chr01: 49941202-49953690 Glycine max
Glyma.01G161400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 49941202-49951201 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308243 5265 Fabidae View MSA
124060967 5270 Rosid View MSA
123736890 5271 Pentapetalae View MSA
122787731 5272 Eudicot View MSA
122046351 5273 Angiosperm View MSA
121343907 5274 Embryophyte View MSA
123424109 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.29118 0.0 28.2771   High
cufflinks 4.20671 0.0 24.3431    
cufflinks 3.05287 0.0 20.4494    
cufflinks 2.32443 0.0 17.0828   Low
cufflinks 2.96092 0.0 15.1196    
cufflinks 4.06486 0.0 12.8488    
cufflinks 3.4485 0.0 17.7912    
cufflinks 2.99875 0.0 19.4674    
cufflinks 2.58559 0.0 17.7574    
cufflinks 0.791       Low
cufflinks 2.519        
cufflinks 1.229        
cufflinks 1.064        
cufflinks 0.975        
cufflinks 1.185        
cufflinks 2.35        
cufflinks 0.311       Low
cufflinks 1.226        
cufflinks 1.279        
cufflinks 3.347       High
cufflinks 2.041        
cufflinks 2.483        
cufflinks 1.783        
cufflinks 1.486        
cufflinks 3.274       High
cufflinks 1.122        

0 Strain