Gene : Glyma.01G160000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR23416:SF63 - SERINE ACETYLTRANSFERASE 2-RELATED Genomic Order:  1600
Name:  ? Glyma.01G160000 Secondary Identifier:  ? PAC:30543759
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax CYSTSYN-PWY Glycine max pathologic  
Gmax PWY-6936 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G160000 0.5kb upstream 0.5kb upstream 4390 true Chr01: 49855573-49859962 Glycine max
Glyma.01G160000 0.5kb upstream 0.5kb upstream 500 false Chr01: 49859463-49859962 Glycine max
Glyma.01G160000 0.5kb downstream 0.5kb downstream 4390 true Chr01: 49855073-49859462 Glycine max
Glyma.01G160000 0.5kb downstream 0.5kb downstream 500 false Chr01: 49855073-49855572 Glycine max
Glyma.01G160000 1.0kb upstream 1.0kb upstream 4890 true Chr01: 49855573-49860462 Glycine max
Glyma.01G160000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 49859463-49860462 Glycine max
Glyma.01G160000 1.0kb downstream 1.0kb downstream 4890 true Chr01: 49854573-49859462 Glycine max
Glyma.01G160000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 49854573-49855572 Glycine max
Glyma.01G160000 2.0kb upstream 2.0kb upstream 5890 true Chr01: 49855573-49861462 Glycine max
Glyma.01G160000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 49859463-49861462 Glycine max
Glyma.01G160000 2.0kb downstream 2.0kb downstream 5890 true Chr01: 49853573-49859462 Glycine max
Glyma.01G160000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 49853573-49855572 Glycine max
Glyma.01G160000 5.0kb upstream 5.0kb upstream 8890 true Chr01: 49855573-49864462 Glycine max
Glyma.01G160000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 49859463-49864462 Glycine max
Glyma.01G160000 5.0kb downstream 5.0kb downstream 8890 true Chr01: 49850573-49859462 Glycine max
Glyma.01G160000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 49850573-49855572 Glycine max
Glyma.01G160000 10.0kb upstream 10.0kb upstream 13890 true Chr01: 49855573-49869462 Glycine max
Glyma.01G160000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 49859463-49869462 Glycine max
Glyma.01G160000 10.0kb downstream 10.0kb downstream 13890 true Chr01: 49845573-49859462 Glycine max
Glyma.01G160000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 49845573-49855572 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304513 5265 Fabidae View MSA
124063279 5270 Rosid View MSA
123743402 5271 Pentapetalae View MSA
122788102 5272 Eudicot View MSA
122045908 5273 Angiosperm View MSA
121349787 5274 Embryophyte View MSA
123426625 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.160188 0.0 0.62856 Low  
cufflinks 0.272536 0.0 1.36509    
cufflinks 0.444735 0.0 2.87975    
cufflinks 1.23465 0.0 5.37924   High
cufflinks 0.28286 0.0 1.4108    
cufflinks 0.0544652 0.0 0.225699 Low Low
cufflinks 0.265969 0.0 1.32797    
cufflinks 0.406738 0.0 2.0018    
cufflinks 0.273867 0.0 1.38396    
cufflinks 0.146        
cufflinks 0.048     Low Low
cufflinks 0.193       High
cufflinks 0.087     Low  
cufflinks 0.056     Low Low
cufflinks 0.044     Low Low
cufflinks 0.135        
cufflinks 0.1        
cufflinks 0.352       High
cufflinks 0.159        
cufflinks 0.091     Low  
cufflinks 0.087        
cufflinks 0.149        
cufflinks 0.149        
cufflinks 0.067        
cufflinks 0.136        
cufflinks 0.076        

0 Strain